| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4185 |
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| Symbol | cheD |
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| ID | 4041043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 768370 |
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| End bp | 769443 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979608 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_586321 |
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| Protein GI | 94313112 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.193658 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATCC GGCTGGGCGC GGCATTTGGG GTGGTGGTGG TGCTGGTGGC CGTCATGATG
ACGCTGGCGT TGGGCCAGAT CACCGATGAG GGCACGCGAG GCTGGCTCTA TGGGCTGGGC
ACGGCTGTGG CGGTGTTCAG CGTAGTGTGC TGGGCCCGTC TGGCCAGTGC GATCGAGGCG
CCGCTCAAGG AGGCCGAATT CATCGCGGAG ACGGTGGCTG CCGGCGATCT GAGCAAGGAT
TTCGAAACCG CGCGCGGTGG CGATTTCGGT CGTCTGCTCG GCGGCCTGGG AGAGATGGAA
GACATGCTGA CCGACCTGGT TACGCGCATC AAGTCCGCCA GCGATTCGAT TTCTTCGGCA
TCGCAGCAAA TCGCCGTGGG CAACACCGAT CTGTCGCAGC GGACCGAGGA GCAGGCGGCC
ACGCTGCAGG AAACCGCGTC GAGCATGGGC GAACTGACTG CGATGGTCCG GCAGAACACC
GAACGCGCGC GCACCGCCAA CGGGCTTGCG GCTTCGGCGT CCGGCATCGC CGAGCGCGGT
GGCGCGATCG TCGGCAATGT CGTGGAAACG ATGGATGCCA TCAGCGTCAG TTCGCGCAAG
GTGACTGACA TCATCGCCGT CATCGAGGGC ATCGCATTCC AGACCAATAT CCTGGCCCTG
AATGCCGCCG TGGAAGCGGC GCGCGCGGGC GAGCAGGGTC GCGGTTTCGC CGTGGTGGCC
GGCGAGGTGC GTACGCTGGC CCAGCGCAGT GCTGCGGCTG CCAAGGAGAT CAACGTGCTG
ATCAACGACT CGGCGCGTCA GGTGGAAAGC GGTTCGGCGC TGGTCGGCCA GGCCGGGCAG
ACCATGGAGG AAATTGTCCA GGCGGTGCGT CGCGTGACGC AGATCCTTGG CGAGATCGCG
ACGGCTTCCG AGCACCAGAG CGACGGCATC GAGCAGGTGA ACGTAGCGGT GACCCAGATG
GACGATGTGA CGCAGCAGAA CGCCGCATTG GTCGAACAGG CGGCTGCGGC TTCGTCGGCG
CTGGCCGAGC AGGCGCAGGA GCTTCAGAAA GTGGTGGGCG AGTTCAAGCT GTAG
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| Protein sequence | MRIRLGAAFG VVVVLVAVMM TLALGQITDE GTRGWLYGLG TAVAVFSVVC WARLASAIEA
PLKEAEFIAE TVAAGDLSKD FETARGGDFG RLLGGLGEME DMLTDLVTRI KSASDSISSA
SQQIAVGNTD LSQRTEEQAA TLQETASSMG ELTAMVRQNT ERARTANGLA ASASGIAERG
GAIVGNVVET MDAISVSSRK VTDIIAVIEG IAFQTNILAL NAAVEAARAG EQGRGFAVVA
GEVRTLAQRS AAAAKEINVL INDSARQVES GSALVGQAGQ TMEEIVQAVR RVTQILGEIA
TASEHQSDGI EQVNVAVTQM DDVTQQNAAL VEQAAAASSA LAEQAQELQK VVGEFKL
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