| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4169 |
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| Symbol | ispH |
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| ID | 4041027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 755356 |
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| End bp | 756354 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979592 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_586305 |
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| Protein GI | 94313096 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0546994 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.117055 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGTGA TACTTGCTCA ACCTCGCGGA TTTTGCGCAG GTGTCGTCCG CGCGATCGAA
ATCGTCGATC GAGCCCTCGT CAAGCATGGC GCCCCCGTCT ATGTGCGACA CGAAATCGTA
CACAACAAGC ATGTGGTGGA AAGCCTGCGC CAGAAAGGCG CGCGCTTTGT CGAGGAACTC
GACGAGGTGC CTGGCAATGC AGTGACGATC TTCAGCGCGC ATGGCGTGTC GCGGGACGTG
GTCAGCGAGG CCGCCCGCCG CGAACTGCAC GCGATCGACG CGACCTGCCC GCTCGTCATC
AAGGTTCACA ATCAGGGACG CCAGTACGCG GCAGCGGGCC GCCACGTCGT CCTGATCGGC
CATGCCGGCC ACCCCGAGGT GGAAGGCACG ATGGGGCAGA TTCCGGGCAA GGTCATCCTG
GTCCAGAACG AGGCCGATGT CGCCACCCTG GACCTGCCGA ATGACGCACC GGTCGCTTAC
ATCACACAGA CCACGTTGTC CGTGGACGAC ACCCGTAATA TCATTGCGGC GCTCGGCGCG
CGGTTTACCA ATCTGGTTGG CCCGAGTACA CGCGATATCT GCTACGCCAC TCAGAACCGG
CAGAGCGCGG TGCGCGAGTT GTCCACCCGC GTGGACGTCA TCCTCGTGAT TGGCGCCACC
AACAGTTCCA ACTCGAATCG CCTGCGCGAA ATCGGCACCG AGAGCGGCGT ACCGAGTTAC
CTGATCGCCG ATGGCAGCGA GCTGGACCCC ACGTGGGTCC GCGACGCCGC CGTCGTCGGC
ATTACCGCGG GTGCCTCGGC ACCCGAAGAA ATGGTGGAAG ACGTCATTGC GGCCTTGCGC
CGCCTTGGTC CGGTCGAAGT TTCGACCATG GAAGGGATCG AGGAACATGC CGAATTCCGC
CTGCCGGCCG AGCTGGACAA TGTGAAGCAG GCCCCGGCGG CCAGTAGTAC CACTGAACCC
AGCGACGCAC GCCTTGCCGA CCAGACGGCG GCAGGCTGA
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| Protein sequence | MQVILAQPRG FCAGVVRAIE IVDRALVKHG APVYVRHEIV HNKHVVESLR QKGARFVEEL
DEVPGNAVTI FSAHGVSRDV VSEAARRELH AIDATCPLVI KVHNQGRQYA AAGRHVVLIG
HAGHPEVEGT MGQIPGKVIL VQNEADVATL DLPNDAPVAY ITQTTLSVDD TRNIIAALGA
RFTNLVGPST RDICYATQNR QSAVRELSTR VDVILVIGAT NSSNSNRLRE IGTESGVPSY
LIADGSELDP TWVRDAAVVG ITAGASAPEE MVEDVIAALR RLGPVEVSTM EGIEEHAEFR
LPAELDNVKQ APAASSTTEP SDARLADQTA AG
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