| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4168 |
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| Symbol | hpnH |
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| ID | 4041026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 754161 |
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| End bp | 755327 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979591 |
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| Product | putative hopanoid biosynthesis associated radical SAM protein |
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| Protein accession | YP_586304 |
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| Protein GI | 94313095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR03470] hopanoid biosynthesis associated radical SAM protein HpnH |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.159717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0664961 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCATTC CCTTTCTGCA GGTCGCCCGC GTAGGCGCCT ACATCGCACG CAAGCATCTT
TCCGGGCAGA AGCGCTACCC GCTCGCCCTG ATGCTCGAGC CCCTGTTCCG CTGCAACCTC
GCCTGCTCGG GCTGCGGCAA GATCGACTAT CCGGACCCCA TCCTGAACCA GCGCCTGTCG
GTGCAGGAAT GCCTGGAGGC CGTGGACGAG TGCGGCGCCC CGGTGGTCTC GATCGCCGGT
GGCGAGCCGC TGCTGCACAA GGACATGCCC GAAATCGTGC GCGGCATCAT CGCCCGCAAG
CGTTTCGTCT ACCTGTGCAC GAACGCGCTG CTGATGGAAA AGAAGATCGA CCAGTACGAG
CCGAGCCCGT ACTTCGTGTG GTCGATCCAC CTGGATGGCG ACCGCGAAAT GCACGACCAT
TCGGTGAACC AGGAAGGCGT GTACGACCGC TGTGTGGAAG CGATCCGCAT GGCCAAGGAG
CGTGGCTTCC GCGTGAACAT CAACTGCACG CTGTTCAACG ATGCCAAGCC TGACCGCGTG
GCCAAGTTCT TCGACTCGGT CAAGGCGATG GGCGTGGACG GCATCACGGT CTCGCCGGGC
TACGCCTACG AGCGCGCCCC GGACCAGCAG CACTTCCTGC ACCGCGGCAA GACCAAGCAA
CTGTTCCGCG ACATCCTGTC GCGCGGCAAC GCCGGCAAGA ACTGGGCGTT CAGCCAGTCG
ACGATGTTCC TGGACTTCCT GGCCGGCAAC CAGACCTACA AGTGCACGCC GTGGGGCAAC
CCGGCGCGTA CCGTGTTCGG CTGGCAGCGT CCGTGCTACC TGGTCGGCGA AGGCTATGTG
AAGACCTTCA AGGAACTGAT GGAAGACACC AACTGGGACG CCTACGGTGT CGGCAACTAC
GAGAAGTGCG CCAACTGCAT GGTCCACAGC GGCTTCGAAG CCACGGCTGT GGCCGATACG
TTCGCGCACC CGATCAAGGC GCTGGGCGTG AGCCTGCGCG GCGTGAAGAC CGATGGCCCG
ATGGCCCCGG ACATCCCGCT GGACAAGCAG CGTCCCGCCG AATACGTCTT CTCGCGCCAC
GTGGAAATCA AGCTGGCCGA GATCGGCAAC CTGAAGAAGG CGCAGGGTAG CCGCGCCGAG
GCCGTGCAGG CCGCTCAGGT GCACTAA
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| Protein sequence | MAIPFLQVAR VGAYIARKHL SGQKRYPLAL MLEPLFRCNL ACSGCGKIDY PDPILNQRLS
VQECLEAVDE CGAPVVSIAG GEPLLHKDMP EIVRGIIARK RFVYLCTNAL LMEKKIDQYE
PSPYFVWSIH LDGDREMHDH SVNQEGVYDR CVEAIRMAKE RGFRVNINCT LFNDAKPDRV
AKFFDSVKAM GVDGITVSPG YAYERAPDQQ HFLHRGKTKQ LFRDILSRGN AGKNWAFSQS
TMFLDFLAGN QTYKCTPWGN PARTVFGWQR PCYLVGEGYV KTFKELMEDT NWDAYGVGNY
EKCANCMVHS GFEATAVADT FAHPIKALGV SLRGVKTDGP MAPDIPLDKQ RPAEYVFSRH
VEIKLAEIGN LKKAQGSRAE AVQAAQVH
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