| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4165 |
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| Symbol | |
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| ID | 4041023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 749600 |
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| End bp | 750475 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979588 |
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| Product | lipoprotein vacJ precursor |
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| Protein accession | YP_586301 |
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| Protein GI | 94313092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.258271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATCCC GCTTTTCGCC TTCGGGCGCC GTAGCACTGC GCCAGCCCCA GCTTGCCCGC
ACGCTGGCCG CCGTCTCGCT CTCTGTCCTC GCCACCGGCT GCGCCACGGG TCCTCAAGCC
AATCCGCAGG ATCCGCTGGA GCCCATGAAC CGGGTGATCT TCAAGGTCAA CGACACGATC
GACACCTATG GCGCGCAACC GCTGGCCAAG GGCTACAAGG CGGTGACGCC AGAGCCGGCC
CGTCTGGCCG TGACCAATTT CTTCTCGAAC CTGTCTGACG TGGGCAACTT CGTCAACAAC
GTGCTGCAGG GCAAGGGCGT CGATGCCACC GAAACGATGA TGCGCATCGC CATCAATTCG
GTGCTCGGCA TTGGCGGCCT GATCGACGTG GCGACGGCCG CTGGCCTGAA CCGCCATTCG
CAGGATTTCG GGCTGACCCT CGGTACCTGG GGCGTGCCCG CTGGCCCATA CCTGGTGCTG
CCGATCTACG GACCGAGTTC GTTCCGCGAC AGCATGGGCG TAGCCGCCAG CATCTACCTG
GACCCGGCGC ACTATCTGGA TCCGGCCTGG CGCAACTCGC TGTTCGGCGT CAACGTGATC
AACACGCGCT CGAACCTGCT GGGCGCCACG GACCTGCTCT CGCAGGCCGC GCTCGACAAG
TACGCGTTCG TGCGCGATGC CTATTCGCAG CGGCGCCAGT ACCTGCTGAA CCAGGGTGAA
AACGCGCTGC CGTCGTACGA CGAGGTGGAC GAGTCGGACA AGGCCTCGGA GGCCAAGCCC
GCTGCTGGGG AGGCCGCCCC GGCAACTCCG GCAACTCCGG CAACTCCGGC AACTCCGGCA
ACCCCGGCTG CCCCGCCATC CGACTCAGCA AAGTAG
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| Protein sequence | MLSRFSPSGA VALRQPQLAR TLAAVSLSVL ATGCATGPQA NPQDPLEPMN RVIFKVNDTI
DTYGAQPLAK GYKAVTPEPA RLAVTNFFSN LSDVGNFVNN VLQGKGVDAT ETMMRIAINS
VLGIGGLIDV ATAAGLNRHS QDFGLTLGTW GVPAGPYLVL PIYGPSSFRD SMGVAASIYL
DPAHYLDPAW RNSLFGVNVI NTRSNLLGAT DLLSQAALDK YAFVRDAYSQ RRQYLLNQGE
NALPSYDEVD ESDKASEAKP AAGEAAPATP ATPATPATPA TPAAPPSDSA K
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