Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4155 |
Symbol | pelA |
ID | 4041013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 731323 |
End bp | 734184 |
Gene Length | 2862 bp |
Protein Length | 953 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979578 |
Product | hypothetical protein |
Protein accession | YP_586291 |
Protein GI | 94313082 |
COG category | [S] Function unknown |
COG ID | [COG3868] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.432055 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.180606 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTGA TTGCCATTGT GGCAGCCGGT GTAGGGCTTG TGCTTGGCAC GCTGACGCCG TCGACCGCGG CGCTGGCGCA GTCACCGGCG CCAGCGCGCG TCGCGCCGAG CGTGGCATTT CACTATGGCG CCCGGCCGCC GGTGGACATG CTGCAGGCCT TCGACGTGGC CGTCGTGGAG CCCGATAGCG GCTTCGATCC GCGTAGCGCC AGAACGCCGA ACACCGCCTG GTTCGCATAT GTCAGCGTCG GCGAAGTCCT GCCGAGCCGC GCGTACTTCA AGGACATCCC CCAGGCCTGG CTTTCCGGCA GCAATGACGC ATGGAACGCC AGAGTCGTCG ATCAGGCCGC CGACGGCTGG CCTGCCTTCT ATGTCGACAA AGTAATCACG CCACTGTGGG AACGCGGCTA TCGCGGCTTT TTCCTCGATA CGCTCGATTC GTACCATCTC GTGGCCAAGA CCGACGCCGA CCGCGCGCGT CAGGAAGCCG GCATGGTGCG TGTGCTCCAG GCAATCAAGG CACGCTATCC AGACGCGAAG CTGCTGTTCA ACCGTGGCTT TGAGATTCTG CCCCAGGTGC ATTCGCTGGC CTACGGCGTG GTGTTTGAAT CGCTGTTCCG CGGCTGGAAC CAGGCGCAAG GCACGTACAC CGAAGTCAGT CAGCAGGACC GTGACTGGTT GCTTAACCAG GCGCGCATCG TCCGCGAGCA GTACGGCCTG CCCGTGATCT CGATCGACTA CTGCCCGCCC ACCGACGCCC AATGCCGACG CGACACCGCG CGTCGCATCG GCGCGCTGGG CATCACTCCT TATGTCACCG ATTCCGGGCT GCAGACCGTG GGCGTCGGGT CGTTCGAGGT CATGCCGCGC CGCGTGCTGG TGGTGCAGGA AAACGAACTC GATGTTTCCA TCGACGACAG CGTCGGCGTG CGTTTCCTGT CGATGCCGCT CAACTATCTG GGCTACCGCG TCGATTTCGC GGAAACGCGC GACACGTTGC CGGAGATCAC TCCCGACCGC TATGCCGGCG TGGTGGTCTG GACCAACGGC AATATCCGCC AGAACCCGGG CCGCTTCTAC GCCTGGGCGG AGAAACAGAT CCGCCAGGGC ATCCCCGTGG CCTTCATGAA TGGGTTTGGC GCGCAGCCCG ACGGGGCGCT GGCACGGATG CTGGACCTGA AGGCAGTCAA GGGCCGCACC TCGGGCGACG TCCAGATCCT GTCGCAGGAC AAGATGATGG GCTTCGAGCA GCAAGTGGCC CCGGACCGTA CCGATGCGGT GCCGGTGCAG ATACGCGATG GCGCGGCGAA CACGCGCACG CTGCTGCGCC TGCGTTCGGG CACGCTGACG TATGACGCCG CCGCGATCAC GGCCTGGGGC GGCTATGTGA TGGGCCCCTA CGCCGTGCGG CAGAACACGC CCAAGGGGCA GGACCGCTGG ATCGTGCAGC CGATCGACTT CCTGCGCGAG GCATTGCGCC TGCCGTTGAT GCCGGTCCCG GATTCCACCA CCGAAAGCGG CCGCCGGCTG CTGACCATCC ATATCGATGG CGATGGGTTT GCCTCGAAGG CTGAGATTCC CGGTGGCGGA TATTCGGGCG AGGTGCTGTT CCGCGAGATC TTCGACCGGT ACCGCCTGCC GATGACGATG TCCGTGATCG AAGGCGAGGT CGGCAAAAGC GGCATGTATC CGAAGCTGGC ACCGGAACTG GAGCCGATTG CCCGCAAGAT CTTCGCGCAG CCGTATGTCG AGGTGGCCAG CCATACCTAT TCGCATCCGT TCGAATGGGG CCGGACCGTG CCGGGACAGG AGAGTAACGC CAGGATCATC GAGGGCGATG ACACCTATCA CCTGGCAATT CCGGGCTACA AGATGGACCT GAACCGTGAA ATCGGCGGCT CGATCGATTA CATCAACAAG GTGCTGTCGC CGAACAAGCC GGTGAAGCTG GTGTTGTGGC CCGGTGACTG CCAGGCCCCG CCCGAGGCGC TCAAGCTGAC CGAAGCCGCT GGCGTGCTGA ACATGAATGG CGGCGACACA CTGATCACGC GCAGCAATCC GACCTGGACC GCCATCGCTC CGCTGGGCAT CCACAAGGCG GATCACACGT TCCAGGTGTT CGCGACCAAC CAGAACGAGA ACGTCTATAC GAACCTGTGG CATGGGCCGT ACTACGGCTT CGAGCGCGTG ATCGAAACGT TCGAGATGAC GGAGAAGCCG TACCGCTTCA AGGCGGTGAA CATCTACTAC CACAGCTACT CGGGTACCAA GGTGGCATCG CTGAAGGCGC TGCGCAAGGT CTATGACTAC GTGCTGACGC AGAACTTGCT GCCGATGCAT TCCACCGACT ACGTGCTCAA GGTGATCGAC TGGCAGGGGA TGGCTGTGGC CCGCGAGTTG GGCGATGGCG CCGACGGTGC GCCGGCCAGT GGCGCGTGGC GCGTGCGGGG CGATGGCAAC CTGCGCAATC TGCGTTGGAC GGGCGCGGGC GTCCCCGACG TGGTCACCGC AACCGGCGTC ACGGGTTCGT CGCCGGCGCC GGGCGGCGGC GTCTACGTGC ATCTGGATGG CGGCAACGCG CGCTTCCGCT TCGTACCCAC GGCCACGCAG TCGGTGCCGG AGCTGCCCGA GGCCAACGGT CTCGTGCGCG ACTGGCGCCG CGATGGCAAT GTCACCCGCT TTACCTTCGC CGGCTACTAC AAGCCGTTCT TCCGGCTCGC CAACGCGGGC CAGTGCAGTG TTTCCATCGA TGGCAAGCCA GTAACCGGTG TGCGCGATCG CAATACGCTG CGTTTCGATA CCCCGGCGGT CAATGATCCG ATCCATGTCC AGCAACAAGT CGAAGTCCGC TGCGGCGCCT GA
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Protein sequence | MAVIAIVAAG VGLVLGTLTP STAALAQSPA PARVAPSVAF HYGARPPVDM LQAFDVAVVE PDSGFDPRSA RTPNTAWFAY VSVGEVLPSR AYFKDIPQAW LSGSNDAWNA RVVDQAADGW PAFYVDKVIT PLWERGYRGF FLDTLDSYHL VAKTDADRAR QEAGMVRVLQ AIKARYPDAK LLFNRGFEIL PQVHSLAYGV VFESLFRGWN QAQGTYTEVS QQDRDWLLNQ ARIVREQYGL PVISIDYCPP TDAQCRRDTA RRIGALGITP YVTDSGLQTV GVGSFEVMPR RVLVVQENEL DVSIDDSVGV RFLSMPLNYL GYRVDFAETR DTLPEITPDR YAGVVVWTNG NIRQNPGRFY AWAEKQIRQG IPVAFMNGFG AQPDGALARM LDLKAVKGRT SGDVQILSQD KMMGFEQQVA PDRTDAVPVQ IRDGAANTRT LLRLRSGTLT YDAAAITAWG GYVMGPYAVR QNTPKGQDRW IVQPIDFLRE ALRLPLMPVP DSTTESGRRL LTIHIDGDGF ASKAEIPGGG YSGEVLFREI FDRYRLPMTM SVIEGEVGKS GMYPKLAPEL EPIARKIFAQ PYVEVASHTY SHPFEWGRTV PGQESNARII EGDDTYHLAI PGYKMDLNRE IGGSIDYINK VLSPNKPVKL VLWPGDCQAP PEALKLTEAA GVLNMNGGDT LITRSNPTWT AIAPLGIHKA DHTFQVFATN QNENVYTNLW HGPYYGFERV IETFEMTEKP YRFKAVNIYY HSYSGTKVAS LKALRKVYDY VLTQNLLPMH STDYVLKVID WQGMAVAREL GDGADGAPAS GAWRVRGDGN LRNLRWTGAG VPDVVTATGV TGSSPAPGGG VYVHLDGGNA RFRFVPTATQ SVPELPEANG LVRDWRRDGN VTRFTFAGYY KPFFRLANAG QCSVSIDGKP VTGVRDRNTL RFDTPAVNDP IHVQQQVEVR CGA
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