| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4152 |
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| Symbol | tnp |
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| ID | 4041010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 726629 |
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| End bp | 727594 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637979575 |
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| Product | transposase ISRme5 (copy d) |
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| Protein accession | YP_586288 |
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| Protein GI | 94313079 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.29962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.334182 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATCTGA GGCTGCACAA GAACGCCACC ACGACACCCA GGATCCGCGC CGAGATCCAG
GTCAGCAAGG AGCCCATGAG GGTTCTGGCC CAGCGCTTTG GCGTGAGTGT CTCCACCATC
GCTCGCTGGA AGAAGCGTGC ATCGGTTCAT GACGCCTCCC ATACCCCTCA TCGACTGCAA
ACCACGCTGA CGCCGGCCCA GGAGTCCATC GTGCTCGTCT TGCGTAAAAG CCTGGGCCTT
TCGCTGGATG ACCTGCTGGC AGTCGTACGC GAGTTCATCC ATCCGACCGT CTCACGCGCT
GCCTTGCACC GCATGCTCAA ACGCCATGGA GTGTCGGCGC GCGAGGCATT GAGCGTGGAT
CGCCCCAGGA CCAAGCCGTT CAAGGCCTAC GAGCCCGGCT TCGTCCACAT CGATGTGAAG
TACCTGCCGC AGATGGCGGA CGAAACCACG CGGCGTTACC TGTTTGTGGC CATTGATCGC
GCCACCCGCT GGGTGTTCGT GCGTGTCTAT GCCAGCAAGA GCGCTACCAA CGCCCGGCGC
TTCCTGAAGG AATTGCACAA GGCCGCTGCC TTCCGTATCC GAACGATCCT GACCGACAAC
GGCAAGGAAT TCACGGATCG CTTCATCACA CGGGGAGAGC GTACGCCGAC CGGCAGGCAT
CAGTTCGATC AGCTCTGCGA GGAGCTAGGC ATTGAGCATC GCCTGACCCG CCCAAAACAC
CCGCAGACCA ACGGCATGGT TGAACGCTTC AACGGGCGCA TCGCCGACAT CCTGCGCACC
CATCACTTCC ATTCCGGCGA AGAACTTGAG GCCACCATCC TGCGGTATGT CTGGCTGTAC
AATCACCAAC TGCCACAGAA AGCCTTGGGG CATGTCAGCC CCATCCAGGC CATGAAACAA
TGGCAGCGAT CACACCCCGA ACTGTTCAAC AGACGTGTTA CCAATCAGCC GGGACACGAC
AGATAG
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| Protein sequence | MHLRLHKNAT TTPRIRAEIQ VSKEPMRVLA QRFGVSVSTI ARWKKRASVH DASHTPHRLQ
TTLTPAQESI VLVLRKSLGL SLDDLLAVVR EFIHPTVSRA ALHRMLKRHG VSAREALSVD
RPRTKPFKAY EPGFVHIDVK YLPQMADETT RRYLFVAIDR ATRWVFVRVY ASKSATNARR
FLKELHKAAA FRIRTILTDN GKEFTDRFIT RGERTPTGRH QFDQLCEELG IEHRLTRPKH
PQTNGMVERF NGRIADILRT HHFHSGEELE ATILRYVWLY NHQLPQKALG HVSPIQAMKQ
WQRSHPELFN RRVTNQPGHD R
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