| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4143 |
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| Symbol | |
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| ID | 4041001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 717351 |
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| End bp | 718580 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637979566 |
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| Product | putative diguanylate cyclase |
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| Protein accession | YP_586279 |
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| Protein GI | 94313070 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000307242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.739273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCTGG CCCAGCAGAC CATCCTGGTC GTGATGATGG TGGTTTTCTC CAGCACGCTC
GTCATGGCGG CGGGGCTGGT GCTCGCGCTG CGCGCCAATG AGGCTGGCCG CCTGTGGGCC
GTCGGGCATG TGATCGCCTC GGGCGCGGGG CTGGTCATCG CGGCCAGCGC AAGCGCCGGA
TCGGCGGAAC TCGGCGCGCT CGGCGCCGGT GCCTATGTGT TTGGCCGCCT GACGATCTAC
CGGGGTGTGC GCGTCTACTA CGGCATGTCC GAACACGCGG CGCTGCTGCA CGGTGTCGGC
TTCGTGACGC TGGTGCTGCT GATGCTGCTG ACCGGCCTGC CCGATGGCAG CAGGCTCGTG
CATGGCCTCG CGTACGGCTT GCTGGCCCTG ATCTCGTTTT TCACTGTCAT CACCATGCTG
CGCAGCGCGC GCGGCCGCAG GAGCATCGGC AGCCCGCTGG TGCTGGCCTC CCACCTGGTG
CTGCTGATCT CGCAGGTGGC GGCGCTGAGC TACGGGGCGA CATTCAAGGG TTTCGAGGTC
ACGCCTTTCT TCCTGCAGCC CGAAGGCTCG GTCTGGCTGC TGGCGCCGCT GGTGGCCGTG
TTGCTGGGCC TGTTCGGTTT CTGCCTGATG TCGATGGAGC AGATCATCGC GCGCAACGAG
AGCGGCGCGC GTACCGATGC GCTGACCGGG CTGCTCAATC GCGGCGCGCT CGACATGCTG
GCCATCAGCA TGATCGCGCG CTGGCAGCGC AACGGCGAGG CGCTGTCGTG CCTCGTGATC
GACGTCGACT ATTTCAAGCT GGTCAACGAC ACGCACGGCC ACCATGCCGG TGACAACGTG
CTGCGTGAAA TCGCGACGGC GCTAGACAAT TCGCGGCGCG CGTCGGATAT TGCCGCGCGC
TACGGTGGCG AGGAGTTTTG CATCCTCTGT CCGCATACGG ACGAGCACCA GGCCACTGCG
CTGGCCAATC GTATTCTGCG GAAGGTGAGG GCGATCGAAC TGCCCGGCGC GGGCGGTCAT
GCCAGCGTCA GCATCGGCGT GGCCGAGCTG CGCGGCGGGC CCTCGAGCCG TGAGGGCCTG
TGGCGCAGCC TGTTCGCCAC GGCGGACCGC GCGCTCTATC AGGCCAAGCA GCGCGGCCGC
GACCAGTTCA TGCTGGCGTC CAGCATGATC GAAGAGACAC CGGTCGGCGA CGCGCTGCAA
TCGGTGACCG AGCCGCAGAT GATTGTTTGA
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| Protein sequence | MHLAQQTILV VMMVVFSSTL VMAAGLVLAL RANEAGRLWA VGHVIASGAG LVIAASASAG
SAELGALGAG AYVFGRLTIY RGVRVYYGMS EHAALLHGVG FVTLVLLMLL TGLPDGSRLV
HGLAYGLLAL ISFFTVITML RSARGRRSIG SPLVLASHLV LLISQVAALS YGATFKGFEV
TPFFLQPEGS VWLLAPLVAV LLGLFGFCLM SMEQIIARNE SGARTDALTG LLNRGALDML
AISMIARWQR NGEALSCLVI DVDYFKLVND THGHHAGDNV LREIATALDN SRRASDIAAR
YGGEEFCILC PHTDEHQATA LANRILRKVR AIELPGAGGH ASVSIGVAEL RGGPSSREGL
WRSLFATADR ALYQAKQRGR DQFMLASSMI EETPVGDALQ SVTEPQMIV
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