Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4131 |
Symbol | |
ID | 4040989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 705457 |
End bp | 706110 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637979554 |
Product | 1-cysteine peroxiredoxin |
Protein accession | YP_586267 |
Protein GI | 94313058 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.314876 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATCC GACTTGGCGA GGAAGCACCG GACTTCACCG CCGACACCAC TGAAGGGAAG ATTCATTTTC ATGAGTGGAT CGGCGACAGC TGGGCCATCC TTTTCTCGCA CCCCAAGGAT TTCACGCCGG TCTGCACCAC CGAGCTCGGC TACATGGCCA AGCTGAAGCC CGAGTTCGAC AAACGCAATA CGAAGATCAT CGGCCTGTCG ATCGATCCGG TGGGCGACCA TTCGCGCTGG GTCAAGGACA TCGAGGAAAC GCAGGGCGCC ACGGTCAACT ACCCGATGAT CGGCGATCAC GACCTCAAGG TGGCCAAGCT CTACGACATG ATCCACCCCG AGGCGAGCGG CGGCCCACGC ACGGCAGCGG ACAACGCCAC GATCCGCGCG GTGTTCATGA TCGGCCCTGA CAAGAAGGTC AAGGCCATGC TGGTCTACCC GATGAGCGCG GGACGCAATT TCGACGAGGT GCTGCGCCTG CTCGACTCGC TGCAACTGAA CGCGAAACAC ACCGTCGCCA CACCCGTCAA CTGGAAGCCG GGCGACGACG TGATCATCCC CACCTCGGTG TCGGATGACG ACGCGAAGAA GAAATATCCA CAGGGCTTCA AGACGCTCAA GCCTTATCTG CGAACGGTTG CCCAGCCGAA GTAG
|
Protein sequence | MAIRLGEEAP DFTADTTEGK IHFHEWIGDS WAILFSHPKD FTPVCTTELG YMAKLKPEFD KRNTKIIGLS IDPVGDHSRW VKDIEETQGA TVNYPMIGDH DLKVAKLYDM IHPEASGGPR TAADNATIRA VFMIGPDKKV KAMLVYPMSA GRNFDEVLRL LDSLQLNAKH TVATPVNWKP GDDVIIPTSV SDDDAKKKYP QGFKTLKPYL RTVAQPK
|
| |