| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4116 |
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| Symbol | psd |
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| ID | 4040974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 686559 |
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| End bp | 687413 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979539 |
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| Product | phosphatidylserine decarboxylase |
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| Protein accession | YP_586252 |
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| Protein GI | 94313043 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTCT CGGTCCTGCT GCAACGCCTC GCCCCGCTAC ACCTGCTGAC CCGTATCGCA
GGTCAACTGG CGGATTGCCG CCAGCCCTGG CTCGCCCAGT ACCTGATCCG CACGTTCGTG
CGCCGGCACA AGATCGACCT CGATGAGGCA TTGGTCAGCG ACCTCGCCAC CTATCCGACG
TTCAACGAGT TCTTTATCCG CGCGCTGCGC CCCGGCGCGC GCCCGATCGC CGCAGCAGAC
TGGACCAGCC CGGTGGACGG CACGATCAGC CAGATTGGGC GCGTCGAAGC TGGCCAGATG
ATCCATGCCA AGCAACATGC CTATAGCGCC ACCGCGTTGC TGGGGGATGC CGCCCTCGCG
AAACAGCTGG AGGGCGGGTG CTTTTCCACG GTGTACCTGA GCCCCCGTAA CTACCACCGG
ATTCACATGC CGTGCGAGGG GCGCCTGCTG GGCATGCGTC ATGTGCCCGG CAAGCTGTAC
TCCGTCAGGC CCGATATCGT TGAAGGCATC GACGGACTGC TCGCCATCAA TGAGCGTCTG
GTTTGCTGGT TCGAGCATCC GCAGCACGGC GTCTTTGCGC TGGTGCTCGT GGGTGCTGCC
ATCGTCGGGC GCATCGCCAC GGTCTGGCAT GGCCTGGTGG AGCCCAAGCG ATCCGGGCAA
GTCTCGGAGT GGCACTACGC CGACGGCGCT TCCGCACCTC AACTGAAGGA TCTGCTTCAG
GGTGTGGAGA TGGGGCACTT CCAGCTCGGC TCGACGATTG TGCTGCTGAT GCCGGGATCG
GCATGGCAAT ACCATCCTGA CTGGCAGGTC GGACAGCCGG TGCGGCTGGG TCAGGCAATT
GCCAGCCGCG GCTGA
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| Protein sequence | MSFSVLLQRL APLHLLTRIA GQLADCRQPW LAQYLIRTFV RRHKIDLDEA LVSDLATYPT
FNEFFIRALR PGARPIAAAD WTSPVDGTIS QIGRVEAGQM IHAKQHAYSA TALLGDAALA
KQLEGGCFST VYLSPRNYHR IHMPCEGRLL GMRHVPGKLY SVRPDIVEGI DGLLAINERL
VCWFEHPQHG VFALVLVGAA IVGRIATVWH GLVEPKRSGQ VSEWHYADGA SAPQLKDLLQ
GVEMGHFQLG STIVLLMPGS AWQYHPDWQV GQPVRLGQAI ASRG
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