Gene Rmet_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4112 
Symbol 
ID4040970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp683359 
End bp684312 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID637979535 
Productoxidoreductase/oxygenase, vanB family 
Protein accessionYP_586248 
Protein GI94313039 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCC GGCCCATCAA GACCGTTTCG GTGGTGGTGT CCGCCATCGA CGAGCCACTG 
CCCGGCGTCA AGCGGTTCGT CCTCAGCGAC CAGGACCACT GGCCGTTGCC GCCTTTCACC
CCCGGCGCGC ATATCGACCT GCATCTCGGA GGCGGCCTGG TGCGCACGTA CTCGCTGTGC
AACGAACCTT CGGACAGGAA CCGGTATGTC ATCGCCGTGA AGCACGAGGT GGCGGGGCGA
GGGGGATCGG CCTTCGTGCA CGAGCGGCTC GATGTCGGGG CGTCGATCGG GGTGTCGCTG
CCCAGAGGTG GCATCCGCAC CACGGACACG GGGATGAACG TCTTCATCGC AGGCGGGATA
GGTGTGACGC CGTTTATCTC GACGATCCGC GATCTCGAAC TGCGGGGCCA GACGAACTAC
GTGCTGCACT GGTCCAGCGC GGGGGTGCCA TCGCTCGTCG ACATGCTGGG CGATGCCATC
GCGGCGGGCA GGGTCCGGCT TTACGACACA CGCGTCGAAT CCGCGCCCGA TATGGATGCG
ATTCTGAATG CGTGCGGTGA GAATGCCAAA GCCTACTGCT GCGGTCCGAT GAGGATGCTT
GACGCCTTCG AGCGGATCGT CGAAGGCTGG CCGGACGCCC GCAAGCACAT CGAGCGCTTC
GCGCCGCCCA AGCCTGTGGA AGATACCGAC GCGGCGCCTT ATACCGTGGT GCTGGCAAGG
AGCGGGAAGG AGGCGATCGT CGAGCCACAT GTCGGGCTGG TCGGAACGCT GGAGGCACTT
GGGGCGGACG TGTCCGTGTC TTGCGGAGGC GGCGTTTGTG GCGCGTGCAG GACGACCTGG
CTGGAAGGGC CGCCGATCCA TCGGGACCGC GTTCTGTCGC CGGAAGAGCG CGCCCAGGAC
GTCATGGTCT GTGTGGCCGG ATGCGCGGGG TCACGTCTGG TGCTGGATCT GTAG
 
Protein sequence
MAARPIKTVS VVVSAIDEPL PGVKRFVLSD QDHWPLPPFT PGAHIDLHLG GGLVRTYSLC 
NEPSDRNRYV IAVKHEVAGR GGSAFVHERL DVGASIGVSL PRGGIRTTDT GMNVFIAGGI
GVTPFISTIR DLELRGQTNY VLHWSSAGVP SLVDMLGDAI AAGRVRLYDT RVESAPDMDA
ILNACGENAK AYCCGPMRML DAFERIVEGW PDARKHIERF APPKPVEDTD AAPYTVVLAR
SGKEAIVEPH VGLVGTLEAL GADVSVSCGG GVCGACRTTW LEGPPIHRDR VLSPEERAQD
VMVCVAGCAG SRLVLDL