Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4098 |
Symbol | |
ID | 4040956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 665784 |
End bp | 666494 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979521 |
Product | hypothetical protein |
Protein accession | YP_586234 |
Protein GI | 94313025 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.258612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTCG AGAACCAGAA ACCTATTCCG ACCAGCATGC ACGGCGGTGT GCTGTCGTTT GTCGCAGGCT TTGTCGATGT GGTTGGCTTC ATCGCCCTGT TCGGGCTGTT CACGGCCCAC GTGACCGGCA ACTTCATCAT GATCGGCGTG GAGTTGACCG GGAACTCGGA CGGATTGGCG ACCAAGCTGC TGGCACTGCC GGCCTTTGTC GTCGCAGTGG CCGCCACACG TGTGCTCGAG TCGAATTTCG CGAGACGCCA GCGTCCCGTG GTTGCGCTGC TGCTCGCCAT CGAATGCTTG TTCCTGCTGC TGTTCATCGG CACCGGGCTT TGGGCGAAGG CTGGCGCTGG CCTGACTGCC AATGCATTGC CGTCCACGCT TGCGGGAATG CTGGCCGTGG TGGCCATGGG TATCCAGAAC GCGTTGTCCC GTACCGCGCT GGCCGATCTG GGGCCAACCA CCATCATGAC TGGCAACACT ACCCAGGTCG TGATCGATCT CGTCGATCTG ACTTCCGCCA GCCCGGAACA GACCGGGGCG ATCGTCACGC GGCTGCGCAA GATGCTGCCA GCCGTAGTGG GGTTTGCCGC CGGCGCGGTG CTCGGCGCGC TTGCCTATCA GGCGGTCAGT TTCTGGTGCG TCTTTCTGCC GGTGCTGCTG CTGGCGGCGG TGTGTCGCCA GCGTTGGCCC GGCAGGGTGG CGCTGGCCTG A
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Protein sequence | MALENQKPIP TSMHGGVLSF VAGFVDVVGF IALFGLFTAH VTGNFIMIGV ELTGNSDGLA TKLLALPAFV VAVAATRVLE SNFARRQRPV VALLLAIECL FLLLFIGTGL WAKAGAGLTA NALPSTLAGM LAVVAMGIQN ALSRTALADL GPTTIMTGNT TQVVIDLVDL TSASPEQTGA IVTRLRKMLP AVVGFAAGAV LGALAYQAVS FWCVFLPVLL LAAVCRQRWP GRVALA
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