Gene Rmet_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4087 
Symbol 
ID4040945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp655530 
End bp656096 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID637979510 
Producthypothetical protein 
Protein accessionYP_586223 
Protein GI291481511 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00226644 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCATCCG TGGCGCTCAT CGGGCTGCTG GCCGGCTGCA GCTCGCCGAA ATCGCGGTTC 
TACACGCTAG ATCCGGACAA CACCGTGGAA CGTGCCTCCA CCGCGACGCC AATCCGTGTC
GTCGTCGGGC CGGTAACAAT CCCGGATCTG GTCGATCGGC CTCAGATCGT GACACGTGTC
TCGGCCAATG AAGTCAAGGT CAACGAATTC GCACGCTGGG CCGAGCCGCT CAAGTCCGAA
ATCTCCCAGG TCATCGCCGC CGATCTGAGA ACCATGCTGG GGTCCGATCA AGTGACTGTC
TTCGATACTG GTTCGAATGC AATGCCGGCC TGGCGTGTCC GCGTGGATAT CCTGAGTCTG
GATTCGGAGC CGGCCGTCGC CGTGTCGATG GATGCGCTGT GGACCATCCA GCCGCCGGGG
AAGCAGCCGG CGATTGCCGG GCGCTCGGTG GTGCGCGAGG CCGTTGCCAG CGATGGCTTC
GACGCGATCA TCGCAGCGCA TAACCGCGCC CTCGCCTCGG TGAGCCGCGA TATCGCCACG
TCGATTCGCA CCCAGCCGGG CCGCTGA
 
Protein sequence
MASVALIGLL AGCSSPKSRF YTLDPDNTVE RASTATPIRV VVGPVTIPDL VDRPQIVTRV 
SANEVKVNEF ARWAEPLKSE ISQVIAADLR TMLGSDQVTV FDTGSNAMPA WRVRVDILSL
DSEPAVAVSM DALWTIQPPG KQPAIAGRSV VREAVASDGF DAIIAAHNRA LASVSRDIAT
SIRTQPGR