Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4078 |
Symbol | oxlT |
ID | 4040936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 646989 |
End bp | 648416 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637979502 |
Product | major facilitator superfamily oxalate/formate antiporter |
Protein accession | YP_586215 |
Protein GI | 94313006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.801255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGTG TGATGAATGA AGGCAGCAGC CCGGCCTATG GCCCGGCCCC GTTCTTTTCC AAGGAAGCGA CCTACGCCAA GCCGGGATTT TCCCGCTGGA TGGTCCCGCC CGCCGCGCTG GCGGTTCACC TTTGCATCGG CCAGGCCTAT GCATTCTCGG TATTCAACGT ACCGCTATCG AGGGTAATCG GCATTACCGA GTCAGCGCCC GATGACTGGA AACTGACCAC GCTTGGCTGG ATTTTCTCGC TGGCGATCTT CTTCCTTGGC ATTTCCGCTG CATTCGCCGG CAAATGGCTC GAGCGCGTGG GTCCACGACT GACGATGTTC ACCGCCGCCT GCTGCTTTGG CAGCGGGTTC CTGGTCTCCG CGCTGGGTAT CTACACGCAC CAGATCGCCC TGCTCTATCT CGGTTACGGC GTGCTGGGCG GCATCGGACT GGGCCTGGGC TATGTATCGC CCGTGTCCAC GCTGATTCGC TGGTTCCCGG ACCGTCGCGG CATGGCCACC GGCATGGCGA TCATGGGCTT CGGCGGCGGC GCGATGATCG CCGCACCGCT GTCCGTGGCG CTGATGAACA CCTTCAAGAG CGCTACGTCG GTCGGTGTGG CCCAGACTTT CGTGGTCATG GGCATCGGCT ACTTCGTGTC GATGCTGATC GGCTCGCTGG CCATCCGCGT GCCCGCCCCG GGCTGGAAGC CGGCCGGCTG GACCCCGCCC ACCACCGCCA GCAAGATGAT CACGCGTAAC CACGTGCACA TCGACCAGGC TCTGAAGACG TCTCAGTTCT ACCTGCTGTG GCTGGTGCTG TTCCTGAACG TGACGGCCGG CATCGGCGTG CTGGGTCAGG CGTCGCTGAT GATTCAGGAG AGCTTCAAGG GCAGCGTGAC CGCCGCCGCC GCAGCCGGCT TCGTGGGCCT GCTGTCTCTG TTCAATATGG GCGGCCGCTT TTTCTGGGCT TCGTCCTCTG ACTGGATCGG CCGCAAGAAC ACCTACTTCG TATTCTTCGC CCTGGGCGCT GTCCTGTACT GGCTGGTGCC ACAGCTTGGC GCAAGCGGCA ACATCGCGCT GTTCGTGCTG GCCTACTGCG TGATCATGTC GATGTACGGT GGCGGCTTCG CCACGATCCC GGCTTATCTG GCCGACATGT TCGGCACCGC CTTCGTGGGC GGCATCCACG GTCGCCTGCT GACGGCCTGG GCCGCTGCGG GTATTGCCGG CCCGGTGCTC GTGAACTACA TCCGCGAGTA CCAGGTAGCG CACGGCGTGA CCGGCGCCGA CGCGTACACG ATGACGCTGC ACATCATGGC GGCCCTGCTC GTGGTCGGCT TCATCTGCAA TCTGCTGGTG GCGCGCGTCA GCGACAGGCA CCACATGAGC GAAGCCGATG TATCCAGCCT TGCCGGCAAT GCCAGCGCCG CCCACTGA
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Protein sequence | MSSVMNEGSS PAYGPAPFFS KEATYAKPGF SRWMVPPAAL AVHLCIGQAY AFSVFNVPLS RVIGITESAP DDWKLTTLGW IFSLAIFFLG ISAAFAGKWL ERVGPRLTMF TAACCFGSGF LVSALGIYTH QIALLYLGYG VLGGIGLGLG YVSPVSTLIR WFPDRRGMAT GMAIMGFGGG AMIAAPLSVA LMNTFKSATS VGVAQTFVVM GIGYFVSMLI GSLAIRVPAP GWKPAGWTPP TTASKMITRN HVHIDQALKT SQFYLLWLVL FLNVTAGIGV LGQASLMIQE SFKGSVTAAA AAGFVGLLSL FNMGGRFFWA SSSDWIGRKN TYFVFFALGA VLYWLVPQLG ASGNIALFVL AYCVIMSMYG GGFATIPAYL ADMFGTAFVG GIHGRLLTAW AAAGIAGPVL VNYIREYQVA HGVTGADAYT MTLHIMAALL VVGFICNLLV ARVSDRHHMS EADVSSLAGN ASAAH
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