| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4063 |
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| Symbol | napA |
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| ID | 4040921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 627862 |
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| End bp | 630357 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979487 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_586200 |
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| Protein GI | 94312991 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.127996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTCA CGCGCCGTGA TTTCATCAAG CAGACAGCCA TCGCCGCCAC GGCCTCGGTG
GCGGGCGTCT CGCTGCCGAC GGATGCGGCC AATTTCGTGA CGGACAGCGA AGTCACGAAA
CTGAAATGGT CGAAGGCGCC CTGCCGCTTC TGCGGCACGG GGTGCGGTGT GACCGTCGCG
GTCAAGGACA ACAAGGTGGT GGCCACCCAG GGCGACCCGC TTTGCGAGGT CAACAAGGGC
CTGAATTGCG TGAAGGGCTA CTTCCTGTCG AAGATCATGT ATGGGCAGGA CCGCCTGACC
AAGCCGCTGC TGCGGATGAA GAACGGCAAG TACGACAAGA ACGGCGAATT CGCGCCGGTC
AGCTGGGATC GCGCCTTCGA CGAGATGGAG GCCCAGTTCA AGCGCGTGCT CAAGGAGAAA
GGCCCGACCG CCGTGGGCAT GTTCGGCTCC GGCCAGTGGA CCGTATGGGA AGGCTACGCC
GCTTCCAAGC TGTACAAGGC GGGGTTCCGC TCCAACAACA TCGACCCGAA CGCGCGCCAT
TGCATGGCGT CGGCCGTGAC CGGCTTCATG CGCACCTTCG GCATGGACGA GCCGATGGGC
TGCTATGACG ACATCGAGGC CGCCGACGTC TTTGTGCTGT GGGGCTCCAA TATGGCGGAG
ATGCACCCGA TCCTGTGGAC ACGCATCACG GACCGCCGCC TGAGCCACCC CAAGACCCGC
GTGGCCGTGC TGTCCACGTT CACGCATCGT TCGTTCGACC TGGCCGATAT CCCGGTCATC
TTCAAGCCCC AGACCGACCT GGCGATGCTG AACTTTATCG CCAACTACAT CATCCGCAAT
AACAAGGTCA ACAAGGACTT CGTCAACAAG TACACGGTGT TCAAGGAAGG CGTGACCGAT
ATCGGCTATG GCCTGCGCCC GGACAATCCG CTCCAGAAGG CGGCCAAGAA CGCCGGCAAC
CCGAACGACT CCAAGCTGAT TACGTTCGAC GACTTCGCGA AGTTCGTGTC GAAGTACGAT
GCTGACTACG TCAGCAAGCT CTCCGGCGTG CCCAAGAAGC AGCTCGAGCA ACTGGCCGAG
CTTTATGCCG ACCCGAATCT CAAGGTCATG TCGCTGTGGA CCATGGGTTT CAACCAGCAC
ACGCGCGGCA CGTGGGTCAA CAACATGGCC TACAACGTCC ACCTGCTGAC GGGCAAGATC
GCCACGCCGG GCAACAGTCC GTTCTCGCTG ACAGGGCAGC CATCCGCCTG CGGCACGGCA
CGGGAGGTAG GCACGTTCTC GCACCGGCTG CCGGCCGACA TGGTCGTCAC CAATCCCAAG
CACCGCGAGG AAGCCGAACG TATCTGGAAG CTGCCGCCGG GGACTATCCC CGACAAGCCC
GGCTACCACG CCGTCCTGCA GAACCGGATG CTCAGGGACG GCAAGCTCAA CGCGTACTGG
GTGCAGGTCA ACAACAACAT GCAGGCGGCA GCCAACATGA TGGAGGAGAC CCTGCCCGGC
TACCGCAATC CGACGAACTT CATCGTCGTC TCCGACGCCT ACCCGACGGT CACCGCGCTG
TCGGCCGACC TGATCCTGCC CACCGCGATG TGGGTCGAAA AGGAAGGCGC GTACGGTAAC
GCGGAACGCC GCACGCAGTT CTGGCACCAG CTCGTAGACG CCCCGGGCGA GGCGCGCTCC
GATCTCTGGC AGTTGATGGA ATTCTCGAAG CGCTTCAAGG TCGAGGACGT CTGGCCGGCG
GAACTGATCG CGAAGAAACC CGAGTACAAG GGCAAGACGC TCTTCGACGT GCTGTATCGC
AACGGCCAGG TCGACAAGTT CCCGCTCAAG GAAACCGCCT CCGACTACAA CAACTACGAG
TCCAAGGCTT TCGGCTTCTA CGTCCAGAAG GGCCTGTTCG AGGAATACGC GACCTTCGGC
CGTGGCCACG GCCACGACCT GGCGCCGTTC GACATGTACC ACGAGGCACG CGGCTTGCGC
TGGCCGGTGG TCAACGGCAA GGAAACGCGC TGGCGCTATC GCGAAGGCTC GGACCCGTAC
GTGAAGGCGG GTACCGGCTT CCAGTTCTAC GGCAACCCGG ACGGCAAGGC CGTGATCTAC
GCCCTGCCCT ACGAGCCGCC GGCCGAGTCC CCGGACAAGG AATACCCGTT CTGGCTGGCC
ACGGGCCGCG TGCTCGAACA CTGGCACTCC GGCTCGATGA CGCGGCGCGT GCCGGAGCTG
TACCGCGCCT TCCCGAACGC GGTGTGCTTC ATGCATCCGG AAGACGCCAA GGCACTGGGG
CTGCGGCGCG GGGTGGAAGT GGAAGTGGTC TCGCGTCGCG GCCGTATGCG CACGCGCATC
GAAACCCGCG GACGCGACGC GCCGCCGCGC GGTCTGGTAT TCGTGCCCTG GTTCGATGCC
AGCCAGCTGA TCAACAAGGT CACGCTCGAC GCCACCTGCC CGATCTCGCT GCAGACCGAC
TTCAAGAAGT GCGCGGTCAA GATCGTCAAG GTATGA
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| Protein sequence | MPLTRRDFIK QTAIAATASV AGVSLPTDAA NFVTDSEVTK LKWSKAPCRF CGTGCGVTVA
VKDNKVVATQ GDPLCEVNKG LNCVKGYFLS KIMYGQDRLT KPLLRMKNGK YDKNGEFAPV
SWDRAFDEME AQFKRVLKEK GPTAVGMFGS GQWTVWEGYA ASKLYKAGFR SNNIDPNARH
CMASAVTGFM RTFGMDEPMG CYDDIEAADV FVLWGSNMAE MHPILWTRIT DRRLSHPKTR
VAVLSTFTHR SFDLADIPVI FKPQTDLAML NFIANYIIRN NKVNKDFVNK YTVFKEGVTD
IGYGLRPDNP LQKAAKNAGN PNDSKLITFD DFAKFVSKYD ADYVSKLSGV PKKQLEQLAE
LYADPNLKVM SLWTMGFNQH TRGTWVNNMA YNVHLLTGKI ATPGNSPFSL TGQPSACGTA
REVGTFSHRL PADMVVTNPK HREEAERIWK LPPGTIPDKP GYHAVLQNRM LRDGKLNAYW
VQVNNNMQAA ANMMEETLPG YRNPTNFIVV SDAYPTVTAL SADLILPTAM WVEKEGAYGN
AERRTQFWHQ LVDAPGEARS DLWQLMEFSK RFKVEDVWPA ELIAKKPEYK GKTLFDVLYR
NGQVDKFPLK ETASDYNNYE SKAFGFYVQK GLFEEYATFG RGHGHDLAPF DMYHEARGLR
WPVVNGKETR WRYREGSDPY VKAGTGFQFY GNPDGKAVIY ALPYEPPAES PDKEYPFWLA
TGRVLEHWHS GSMTRRVPEL YRAFPNAVCF MHPEDAKALG LRRGVEVEVV SRRGRMRTRI
ETRGRDAPPR GLVFVPWFDA SQLINKVTLD ATCPISLQTD FKKCAVKIVK V
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