| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4045 |
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| Symbol | tniA |
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| ID | 4040903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 611070 |
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| End bp | 612788 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979469 |
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| Product | transposase |
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| Protein accession | YP_586182 |
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| Protein GI | 94312973 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.370062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.501685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAATA CTCGTGTGCA CCAAAGCGAG ATGAGCATGG CGACCGATAC CGCACCGATT
ACCGAGCACG GCGTGGCCAC CCTGCCAGAA CAGGCATGGG AGCGTGCGCG TCGTCGCGCG
GAGATCATTG GGCCGTTGGC GCAGTCGGAG ACGGTTGGGC ATGAAGCGGC CGACGCGGCA
GCCCAGGCAT TGGGGCTGTC CCGGCGGCAG GTCTACGTCC TGATCCGCCG TGCCCGGCTA
GGATCGGGGC TGGTCACTGA CTTGGCTCTT GGGCAGTCGA GCGGTGGCAA AGGTAAAGGC
CGCTTGCCGG AGTCGGTCGA ACGAATCATC CGCGAGTTAC TGCAAAAGCG CTTCCTGACC
AAGCAGAAGC GTAGCTTGGC GGCGTTCCAC CGCGAAGTTG TGCGGGCGTG CAAGCTGCAA
AAGCTGCGGG TGCCGGCGCG CAACACGGTG GCTCTGCGGA TCGCCGGCCT CGATCCGCGC
GAGGTCACTC ACCGCCGGGA AGGACAAGAT GCCGCCCGCG ACCTGCAAGG TGTTGGTGGT
GTTCCGCCAC CCGTCTCCGC GCCGCTGGAG CAGGTGCAGA TCGACCACAC AGTCATCGAC
CTGATCGTGG TGGACGAGCG CGACCGGCAA CCGATTGGCC GTCCATACCT GACCCTCGCC
ATCGACGTAT TCACCCGCTG CGTGGTTGGC ATGGTCGTTA CGCTGGAAGC CCCGTCCGCC
GTCTCGGTCG GCTTGTGCTT GGTGCATGCC GCCTGCGACA AGCGCCCTTG GTTGGAAGGG
TTGAACGTAG AGATGGATTG GCCGATGAGC GGCAAGCCCA GACTGCTCTA CTTGGACAAC
GCGGCTGAGT TCAAGAGCGA GGCGCTGCGC CGTGGCTGCG AGCAGCATGG CATCCGGTTG
GACTATCGCC CGCTTGGGCA GCCGCACTAC GGCGGTATCG TGGAACGGAT CATCGGCACG
GCGATGCAGA TGATCCACGA CGAATTGCCG GGGACGACCT TCTCCAATCC TGACCAGCGC
GGGGAATACG CCTCCGAGAA GATGGCCGCC CTGACACTGC GCGAGCTGGA GCGCTGGCTC
ACATTGGCGG TCGGCACCTA TCACGGCTCC GTGCACAACG GCCTGCTCCA ACCGCCGGCC
GCGCGCTGGG CCGAAGCTAT CACGCGGACC GGCGTGCCAA CCGTCATCAC TCGCGCTACG
GCTTTTCTGG TCGATTTTCT GCCCATCATC CGCCGCACGC TGACCCGCAC CGGCTTCGTC
ATCGACCACA TCCACTACTA CGCCGATGCG CTCAAGCCGT GGATAGCTCG GCGGGACCGC
TTGCCTGCGT TCCTGATCCG GCGCGACCCG CGCGACATCA GCCGCATATG GGTGCTGGAA
CCAGAGGGGC AGCACTACCT GGAAATTCCC TACCGTACCT TGTCGCACCC GGCTGTCACC
CTCTGGGAAC AACGACAGGC GCTGGCGAAA TTGCGGCAGC AAGGGCGCGA ACAGGTGGAT
GAGTCGGCGT TGTTCCGCAT GATCGGCCAG ATGCGCGAAA TCGTTACCAC CGCGCAGAAG
GCTACGCGCA AGGCGCGGCG CGACGCGGAT CGACGCCAGC ATCTCAAGGC AACGGCAACG
CCTGTCAAAA CCACGCCACC ACCGGGCGCT GACATGGATG GGCAGCAGGC AGACAACCAG
CCGCCGGCCA AACCGTTCGA CCAGATTGAG GAGTGGTAG
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| Protein sequence | MLNTRVHQSE MSMATDTAPI TEHGVATLPE QAWERARRRA EIIGPLAQSE TVGHEAADAA
AQALGLSRRQ VYVLIRRARL GSGLVTDLAL GQSSGGKGKG RLPESVERII RELLQKRFLT
KQKRSLAAFH REVVRACKLQ KLRVPARNTV ALRIAGLDPR EVTHRREGQD AARDLQGVGG
VPPPVSAPLE QVQIDHTVID LIVVDERDRQ PIGRPYLTLA IDVFTRCVVG MVVTLEAPSA
VSVGLCLVHA ACDKRPWLEG LNVEMDWPMS GKPRLLYLDN AAEFKSEALR RGCEQHGIRL
DYRPLGQPHY GGIVERIIGT AMQMIHDELP GTTFSNPDQR GEYASEKMAA LTLRELERWL
TLAVGTYHGS VHNGLLQPPA ARWAEAITRT GVPTVITRAT AFLVDFLPII RRTLTRTGFV
IDHIHYYADA LKPWIARRDR LPAFLIRRDP RDISRIWVLE PEGQHYLEIP YRTLSHPAVT
LWEQRQALAK LRQQGREQVD ESALFRMIGQ MREIVTTAQK ATRKARRDAD RRQHLKATAT
PVKTTPPPGA DMDGQQADNQ PPAKPFDQIE EW
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