Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_4011 |
Symbol | pcaK |
ID | 4040869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 580928 |
End bp | 582307 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979435 |
Product | protocatechuate (4-hydroxybenzoate) transmembrane transporter |
Protein accession | YP_586148 |
Protein GI | 94312939 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCATG CCCCGCACTC AGCGACCAGT ACGCTAGACG TCCAGTCGCT CATCGACAGC CAGCGCTTCT CCGCGTATCA ATGGCTCATC CTAGTCCTAT GTTTCCTTAT CGTCGCCGTA GATGGCTTTG ACACAGCGGC CATGGGCTAC GTTGCGCCGG CCCTGGTACA GGATTGGGGC ATTGAGAAAT CGTCACTTGG CCCCGTCATG AGCGCCGCGC TGTTCGGCCT GGCCTTCGGC GCGATCTTTG CGGGGCCGAT GGCCGACCGC GTCGGCCGCA AGAAGGTGCT GGTGCTGTCC GTGTTCTTCT TCGGTGCCTG CAGTCTTGCC ACGGCATTTG CGCCGACGAT CCGGTGGCTA ACTGTCTTGC GATTCCTGAC CGGCCTCGGC CTGGGCGCCG CCATGCCCAA CGCGGTAACG CTGATGTCCG AGTACGCGCC AGCGCGCCGC CGCGCGGTAC TGGTCAACAC GATGTTCTGC GGCTTCCCGC TGGGCTCGGC CGCCGGCGGC TTCTTCGCGG CGGCGATCAT CCCGCAGTTC GGCTGGCATA GCGTGCTGGT CTTCGGTGGC GTAGTGCCGC TGGTACTTGC GGTGGTGCTG GTGACTACGC TGCCGGAGTC GGTCCGCTAT ATGGTCGTGC GCCAGTACCC CGCCGACCAG ATCCGGCAGG TGCTGGCGCG CGTGACCGGC GCCCGAGTGG ATGGCGCAGG CGTCTTCACG ATCAGCGAGG CCGCGCCCGC GTCGTCGTCG GCCATCGGCA CTGTGCTGGC GCCGCGCTAT CGACTGGGCT CGACCATGCT GTGGCTTACC TACTTCATGG GACTGGTGAT CTTCTACCTG CTGACGAGCT GGATGCCGAC GCTGATGAAA GACGCCGGTT TCTCACTGCA GCGTGCGTCC TTCCTGACCG CCCTGTTCCC ACTTGGCGGC GGCATCGGCA CCATCGCGGC TGGCTGGTTC ATGGACCGCT TCAATCCGAA CAAGGTCATC GCCATGACCT ACGCCCTGAC CGGCGTGCTG ATCTATGCCG TGGGCCAGGT CGCCAGCGGC GATCAGGTGG TGCTGGGCGT GTTGATCTTC CTGGCCGGCA CCGCGATGAA TGGGGCGCAG TCGTCGATGC CGTCGCTGGC CGCCGCGTTC TATCCGACGC AAGGCCGCGC CACCGGCGTG GCATGGATGC TCGGCATCGG ACGATTCGGC GGCATCACCG GCGCACTGCT CGGCGCCGAA CTGTTGCGCC TGCATCTGGG CTTCGACGTC ATCTTCACGC TGCTGGCGAT CCCCGCGTTC GCCGCCACTG CCGCGCTGGT CGCCAAGCAT GTGGGCGCCC GGGGCGCGGC CCCCGTCGAC ACTGGCGGAG CCATGGTGTC CGGGCACTGA
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Protein sequence | MSHAPHSATS TLDVQSLIDS QRFSAYQWLI LVLCFLIVAV DGFDTAAMGY VAPALVQDWG IEKSSLGPVM SAALFGLAFG AIFAGPMADR VGRKKVLVLS VFFFGACSLA TAFAPTIRWL TVLRFLTGLG LGAAMPNAVT LMSEYAPARR RAVLVNTMFC GFPLGSAAGG FFAAAIIPQF GWHSVLVFGG VVPLVLAVVL VTTLPESVRY MVVRQYPADQ IRQVLARVTG ARVDGAGVFT ISEAAPASSS AIGTVLAPRY RLGSTMLWLT YFMGLVIFYL LTSWMPTLMK DAGFSLQRAS FLTALFPLGG GIGTIAAGWF MDRFNPNKVI AMTYALTGVL IYAVGQVASG DQVVLGVLIF LAGTAMNGAQ SSMPSLAAAF YPTQGRATGV AWMLGIGRFG GITGALLGAE LLRLHLGFDV IFTLLAIPAF AATAALVAKH VGARGAAPVD TGGAMVSGH
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