Gene Rmet_4011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_4011 
SymbolpcaK 
ID4040869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp580928 
End bp582307 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content66% 
IMG OID637979435 
Productprotocatechuate (4-hydroxybenzoate) transmembrane transporter 
Protein accessionYP_586148 
Protein GI94312939 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00895] benzoate transport 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCATG CCCCGCACTC AGCGACCAGT ACGCTAGACG TCCAGTCGCT CATCGACAGC 
CAGCGCTTCT CCGCGTATCA ATGGCTCATC CTAGTCCTAT GTTTCCTTAT CGTCGCCGTA
GATGGCTTTG ACACAGCGGC CATGGGCTAC GTTGCGCCGG CCCTGGTACA GGATTGGGGC
ATTGAGAAAT CGTCACTTGG CCCCGTCATG AGCGCCGCGC TGTTCGGCCT GGCCTTCGGC
GCGATCTTTG CGGGGCCGAT GGCCGACCGC GTCGGCCGCA AGAAGGTGCT GGTGCTGTCC
GTGTTCTTCT TCGGTGCCTG CAGTCTTGCC ACGGCATTTG CGCCGACGAT CCGGTGGCTA
ACTGTCTTGC GATTCCTGAC CGGCCTCGGC CTGGGCGCCG CCATGCCCAA CGCGGTAACG
CTGATGTCCG AGTACGCGCC AGCGCGCCGC CGCGCGGTAC TGGTCAACAC GATGTTCTGC
GGCTTCCCGC TGGGCTCGGC CGCCGGCGGC TTCTTCGCGG CGGCGATCAT CCCGCAGTTC
GGCTGGCATA GCGTGCTGGT CTTCGGTGGC GTAGTGCCGC TGGTACTTGC GGTGGTGCTG
GTGACTACGC TGCCGGAGTC GGTCCGCTAT ATGGTCGTGC GCCAGTACCC CGCCGACCAG
ATCCGGCAGG TGCTGGCGCG CGTGACCGGC GCCCGAGTGG ATGGCGCAGG CGTCTTCACG
ATCAGCGAGG CCGCGCCCGC GTCGTCGTCG GCCATCGGCA CTGTGCTGGC GCCGCGCTAT
CGACTGGGCT CGACCATGCT GTGGCTTACC TACTTCATGG GACTGGTGAT CTTCTACCTG
CTGACGAGCT GGATGCCGAC GCTGATGAAA GACGCCGGTT TCTCACTGCA GCGTGCGTCC
TTCCTGACCG CCCTGTTCCC ACTTGGCGGC GGCATCGGCA CCATCGCGGC TGGCTGGTTC
ATGGACCGCT TCAATCCGAA CAAGGTCATC GCCATGACCT ACGCCCTGAC CGGCGTGCTG
ATCTATGCCG TGGGCCAGGT CGCCAGCGGC GATCAGGTGG TGCTGGGCGT GTTGATCTTC
CTGGCCGGCA CCGCGATGAA TGGGGCGCAG TCGTCGATGC CGTCGCTGGC CGCCGCGTTC
TATCCGACGC AAGGCCGCGC CACCGGCGTG GCATGGATGC TCGGCATCGG ACGATTCGGC
GGCATCACCG GCGCACTGCT CGGCGCCGAA CTGTTGCGCC TGCATCTGGG CTTCGACGTC
ATCTTCACGC TGCTGGCGAT CCCCGCGTTC GCCGCCACTG CCGCGCTGGT CGCCAAGCAT
GTGGGCGCCC GGGGCGCGGC CCCCGTCGAC ACTGGCGGAG CCATGGTGTC CGGGCACTGA
 
Protein sequence
MSHAPHSATS TLDVQSLIDS QRFSAYQWLI LVLCFLIVAV DGFDTAAMGY VAPALVQDWG 
IEKSSLGPVM SAALFGLAFG AIFAGPMADR VGRKKVLVLS VFFFGACSLA TAFAPTIRWL
TVLRFLTGLG LGAAMPNAVT LMSEYAPARR RAVLVNTMFC GFPLGSAAGG FFAAAIIPQF
GWHSVLVFGG VVPLVLAVVL VTTLPESVRY MVVRQYPADQ IRQVLARVTG ARVDGAGVFT
ISEAAPASSS AIGTVLAPRY RLGSTMLWLT YFMGLVIFYL LTSWMPTLMK DAGFSLQRAS
FLTALFPLGG GIGTIAAGWF MDRFNPNKVI AMTYALTGVL IYAVGQVASG DQVVLGVLIF
LAGTAMNGAQ SSMPSLAAAF YPTQGRATGV AWMLGIGRFG GITGALLGAE LLRLHLGFDV
IFTLLAIPAF AATAALVAKH VGARGAAPVD TGGAMVSGH