| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4006 |
|---|
| Symbol | |
|---|
| ID | 4040864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 578199 |
|---|
| End bp | 578834 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637979430 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586143 |
|---|
| Protein GI | 94312934 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATCC GTCTATCCGT TCCGACCGTA GCACTGGCAA TGCTTGGCAC CACCAGCGTG
GCAATGGCCG CCAGCCCAAG CTTCGATTGC GGGAACGCCA AAGGACAGGT GGAGCAATTG
ATCTGCAAGG ACGATACGTT GGCACGACTC GATCGAGAAA CCACCCGGCT CTACGGAATG
GCGCTCGACG CCCGATCATT GCCGGCCCCA CAGAAGAAAA CGCTCCTGGC GGAGCAGCGC
GGCTGGATCA AGGGCCGCAA CGACTGCTGG AAAGCCAGCG ATGCCGGGGT CTGCGTCGCT
GCCAGCTATC TGGAGCGCAT CCACGAGCTG CGCCACGCCT ATGCTGGTGC TCGCACGCAG
GACGACAAGG GCATCAGCCG CGGCCCGTTC GATATCCGCT GCCCAGACGT CAAAGCCGTG
ATTGCCGGCA CATTCGTACA GACAGAGCCG GGGTTCGCCT ATCTGCGCTG GCTCGATCAA
CAACTGGTAC TGACGCAAAC GCCTGCTGCT TCAGGCGCAC GCTATACGGC CACGACCGCT
AATGGGGAAG CAGTGTTCTG GGACAAGGGG CCGGACGCAC AGTTAACGCT CCCCGGCAAG
GCGGATATGA ACTGCCGCGT AGGCATAAGA GACTGA
|
|---|
| Protein sequence | MPIRLSVPTV ALAMLGTTSV AMAASPSFDC GNAKGQVEQL ICKDDTLARL DRETTRLYGM
ALDARSLPAP QKKTLLAEQR GWIKGRNDCW KASDAGVCVA ASYLERIHEL RHAYAGARTQ
DDKGISRGPF DIRCPDVKAV IAGTFVQTEP GFAYLRWLDQ QLVLTQTPAA SGARYTATTA
NGEAVFWDKG PDAQLTLPGK ADMNCRVGIR D
|
|---|
| |