| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4003 |
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| Symbol | |
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| ID | 4040861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 574794 |
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| End bp | 575522 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637979427 |
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| Product | putative aspartate racemase |
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| Protein accession | YP_586140 |
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| Protein GI | 94312931 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1794] Aspartate racemase |
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| TIGRFAM ID | [TIGR00035] aspartate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACAA TAGGACTGAT TGGCGGCATG AGCTGGGAGT CGTCGGCCGA GTACTACCGG
CTGATCAACC AGGGGATGAA GGCCCGCCTG GGCGGACACA GGAATGCCCG TAGCGTCATG
GTCACTGTCT GCTTCGAAGA GGTCAAAACG TTACAGCACG CGGAGCGATG GGAGGACTTG
GGAAACCAGA TGCAGCAGGC GGCACGCCAG GTCGAAGCCG GCGGCGCCGA TTTTGTCGTG
CTTTGCACGA ACACAATGCA CAAGCTGGCC CCCGCTATTG AAGCGGTGCT CGACGTGCCC
TTCCTGCATA TCGTCGACCC GACCGCGGAC GCGCTGCGCC GTGCCGGTAT CGAACGGGTC
GGCCTGCTCG GCACGCGATT TACCATGGAG CAGGATTTTT ACCGCGCCCG AATGGAACAG
CGCCATGGTA TCCAGGTTGT GATACCGGAT CAGGATGACC GTACGCTTGT GCACGACGTC
ATCTACGACG AGCTTTGTCA CGGCGTCGTG CGGAGTGAAT CGCGCGCAGT CTATCAGCGC
ATCATTGAAT CGCTGAAAGC CGGTGGTGCG CAGGGCGTGA TTCTCGGCTG CACGGAAATC
ACGTTGCTGA TCAAGCCCGA GGATTCGGCA TTGCCGACAT TCGATACCAC CGAGCTACAT
GCCATGGCAG CGGTGGCGCT TGCAGCCGGG GAGGTGGCCA GGTGGCCTGA GGCGCTTCTG
CCCGGATAG
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| Protein sequence | MKTIGLIGGM SWESSAEYYR LINQGMKARL GGHRNARSVM VTVCFEEVKT LQHAERWEDL
GNQMQQAARQ VEAGGADFVV LCTNTMHKLA PAIEAVLDVP FLHIVDPTAD ALRRAGIERV
GLLGTRFTME QDFYRARMEQ RHGIQVVIPD QDDRTLVHDV IYDELCHGVV RSESRAVYQR
IIESLKAGGA QGVILGCTEI TLLIKPEDSA LPTFDTTELH AMAAVALAAG EVARWPEALL
PG
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