| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_4001 |
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| Symbol | rpoK |
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| ID | 4040859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 572637 |
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| End bp | 573146 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637979425 |
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| Product | RNA polymerase sigma K factor |
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| Protein accession | YP_586138 |
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| Protein GI | 94312929 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.108923 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCCG ACGCTGGCCC ACATCACGAT ATCCAAGCGC TCTACAGCTG CCACCATCGC
TGGCTGCTCG GCTGGCTGCA TCGGAAGATC GGCTGCTGGC ACCGCTCAGC CGATCTCGCA
CATGACACCT TCATGCGTCT GCTGGCGCGT GAGGAAGCCC TGGCGATCGC CGAACCCCGC
GCGTTCCTGA CGACCGTCGC CCAACGGGTG CTGGCCAACC AGTGGCGACG CGAGAAGCTC
GAGCAGGCGT ATCTGGAAGC CCTCGCCAGC CGGCCGGCCG CACTGGCTCC TTCCGAGGAA
GAACGCGCGA TCCTGCTGGA AACCCTCAAC GACATCGCTG AACGGCTCGA CGGATTGCCT
GTGGTGGTCA AGCGCGCGTT CCTGATGGCG CAGCTCGAAG GCCAGAGCCA GGCCGAAATT
GCTTCCGCCT TGCGAATCTC GGTGACGACG GTCAAGCGCT ATCTGGTTCG CGCCGGCACA
AAGTGCTATT TCGCGATGTC CCTCGCATGA
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| Protein sequence | MAADAGPHHD IQALYSCHHR WLLGWLHRKI GCWHRSADLA HDTFMRLLAR EEALAIAEPR
AFLTTVAQRV LANQWRREKL EQAYLEALAS RPAALAPSEE ERAILLETLN DIAERLDGLP
VVVKRAFLMA QLEGQSQAEI ASALRISVTT VKRYLVRAGT KCYFAMSLA
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