Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3981 |
Symbol | |
ID | 4040839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 547611 |
End bp | 548453 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637979405 |
Product | IclR family transcriptional regulator family |
Protein accession | YP_586118 |
Protein GI | 94312909 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.010992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA CAACCTCGAT TCCGATGCCC GCCGATACCG CCCTGGTATC GGCCGATGCC GCGCGTCCCG CCGAGGACGG GGATCGGAAT TTTGTGACGG CGCTGGCCCG CGGCGTGGAG TTGCTGCGTG CGTTCGGGCC GGACGATGAC TTCCTTGGCA ATGCGGAGTT GTCGCGTCGT ACCGGCATCC CCCGACCAAC GGTTTCGCGT CTGACGTACA CACTGGCCAG TCTCGGATAC CTCGTGTACG TCGAGGCCCA GGAGAAGTAC CGTATTGGCC AGGCGGCGAT GCTGCCCGCG CAGCGCTATC TCTCGGGGGC CGGCATTCGC GATATCGCGC AGCCGCTGAT GCAGTCTCTG GCGTTTGCCA CTGGCTGCAC GGTGGCGCTG GCGGCGCCGG ATCGTCACGA CATGGTGTAT CTCGAGGTGT GCCAGCCGCG TGGTGCGTTG GTGATGAGGC TCACGCCTGG CTCGCGGCTG CCGATGGCGA CATCGGCCAT CGGCAAGGCG TGGCTGGCGG GCCTGACATC CGATCGGCGA GGCGCGGTGT TCGCCGAACT CGAGCGTCAC CATGGGGCGC GTTGGGCATC CATCCGTACC AAGCTTGAGC GTGGACTGCG CGAACACGCG CGACGCGGCT TCTGCATGGC GCACGCCGAG TGGGACCGTT CGGTGAGTGG CGCCGCCGCG CCGGTGAGTC TGGCGGATGG CTCGGAAGTG CTGTCGATCA ACATCGGCGG GGCGTCCACG CGGCTCTCGC CCGAAATTCT TGAAGGCAAT CTTGGCCCCC GCATTCGCGA GTTGGCGGAC GCGCTCGCGG CAAGACTCTG GCGGCCAGGC TGA
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Protein sequence | MKRTTSIPMP ADTALVSADA ARPAEDGDRN FVTALARGVE LLRAFGPDDD FLGNAELSRR TGIPRPTVSR LTYTLASLGY LVYVEAQEKY RIGQAAMLPA QRYLSGAGIR DIAQPLMQSL AFATGCTVAL AAPDRHDMVY LEVCQPRGAL VMRLTPGSRL PMATSAIGKA WLAGLTSDRR GAVFAELERH HGARWASIRT KLERGLREHA RRGFCMAHAE WDRSVSGAAA PVSLADGSEV LSINIGGAST RLSPEILEGN LGPRIRELAD ALAARLWRPG
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