Gene Rmet_3981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3981 
Symbol 
ID4040839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp547611 
End bp548453 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID637979405 
ProductIclR family transcriptional regulator family 
Protein accessionYP_586118 
Protein GI94312909 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.010992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCA CAACCTCGAT TCCGATGCCC GCCGATACCG CCCTGGTATC GGCCGATGCC 
GCGCGTCCCG CCGAGGACGG GGATCGGAAT TTTGTGACGG CGCTGGCCCG CGGCGTGGAG
TTGCTGCGTG CGTTCGGGCC GGACGATGAC TTCCTTGGCA ATGCGGAGTT GTCGCGTCGT
ACCGGCATCC CCCGACCAAC GGTTTCGCGT CTGACGTACA CACTGGCCAG TCTCGGATAC
CTCGTGTACG TCGAGGCCCA GGAGAAGTAC CGTATTGGCC AGGCGGCGAT GCTGCCCGCG
CAGCGCTATC TCTCGGGGGC CGGCATTCGC GATATCGCGC AGCCGCTGAT GCAGTCTCTG
GCGTTTGCCA CTGGCTGCAC GGTGGCGCTG GCGGCGCCGG ATCGTCACGA CATGGTGTAT
CTCGAGGTGT GCCAGCCGCG TGGTGCGTTG GTGATGAGGC TCACGCCTGG CTCGCGGCTG
CCGATGGCGA CATCGGCCAT CGGCAAGGCG TGGCTGGCGG GCCTGACATC CGATCGGCGA
GGCGCGGTGT TCGCCGAACT CGAGCGTCAC CATGGGGCGC GTTGGGCATC CATCCGTACC
AAGCTTGAGC GTGGACTGCG CGAACACGCG CGACGCGGCT TCTGCATGGC GCACGCCGAG
TGGGACCGTT CGGTGAGTGG CGCCGCCGCG CCGGTGAGTC TGGCGGATGG CTCGGAAGTG
CTGTCGATCA ACATCGGCGG GGCGTCCACG CGGCTCTCGC CCGAAATTCT TGAAGGCAAT
CTTGGCCCCC GCATTCGCGA GTTGGCGGAC GCGCTCGCGG CAAGACTCTG GCGGCCAGGC
TGA
 
Protein sequence
MKRTTSIPMP ADTALVSADA ARPAEDGDRN FVTALARGVE LLRAFGPDDD FLGNAELSRR 
TGIPRPTVSR LTYTLASLGY LVYVEAQEKY RIGQAAMLPA QRYLSGAGIR DIAQPLMQSL
AFATGCTVAL AAPDRHDMVY LEVCQPRGAL VMRLTPGSRL PMATSAIGKA WLAGLTSDRR
GAVFAELERH HGARWASIRT KLERGLREHA RRGFCMAHAE WDRSVSGAAA PVSLADGSEV
LSINIGGAST RLSPEILEGN LGPRIRELAD ALAARLWRPG