| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3980 |
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| Symbol | livH4 |
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| ID | 4040838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 546439 |
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| End bp | 547302 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637979404 |
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| Product | ABC transporter permease |
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| Protein accession | YP_586117 |
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| Protein GI | 94312908 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0118656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATTGT TTTTTCAGCA GTTTCTCAAT GGCCTGACTT TGGGCGGCGT CTATAGCCTG
GTCGCACTCG GGCTGACCCT GGTCTACGGC ATCTTGCACG TACCAAACTT CGCGCACGGC
GCGTTCTACA TGGCCGGCGC GTATGTGTCG TACTACGCCA TGACCACGCT GGGCATGAAT
TACTGGCTGG CCATGCTGGC GGCGGCCGTC GTGGTGGCGA TGCTGTCGAT GCTGGCGGAC
CGCCTGGTCT TTTATCCGCT GCGCCATGCG CCCGAGATTC ACGACATGAT CGCCGCCATC
GGCATCCTGC TGTTTCTCGA AGCCGGCGCG CAGGCGCTGT GGGGGGCCGA CTTCCACCGC
ATGCCCACCC CATATGGACA GATGGTCGAG ATCTTCGGCC TGACCGCTCC ACTGCAACGG
CTGTTGATCA TCGTCGCGGC ATTCGGCCTG ATGGTGCTGC TGCACCTGTT CCTGACGCGC
ACGGTCACGG GTTCGACGAT CGTCGCCATG GCGCAGAACC GCGAAGGCGC CGCGCTGGTC
GGTATCGACG CCATGCGCGT GACACTGCTT GTGTTCGCGA TCTCTGGCGC GCTGGCCGCC
ATCGCCGCCA CGCTCTACGC GCCGATCAAC CTGGTCTATC CGAGCATGGG CAACCTTGTC
ATCACCAAGG CGTTCGTGAT CATCATCCTC GGCGGCATGG GCAGCATCCC CGGCGCGATC
GTGGGCGGGC TGATCATCGG CATGGCCGAA AGCTTCGGTG GCTTCTACAT CTCCACCGAC
TACAAGGACA TCATCGCCTT CCTGCTGCTT GTGATCATCC TGTCGGTGCG TCCGCAGGGC
CTGTTCGCCG GCAAGACCGC CTGA
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| Protein sequence | MALFFQQFLN GLTLGGVYSL VALGLTLVYG ILHVPNFAHG AFYMAGAYVS YYAMTTLGMN
YWLAMLAAAV VVAMLSMLAD RLVFYPLRHA PEIHDMIAAI GILLFLEAGA QALWGADFHR
MPTPYGQMVE IFGLTAPLQR LLIIVAAFGL MVLLHLFLTR TVTGSTIVAM AQNREGAALV
GIDAMRVTLL VFAISGALAA IAATLYAPIN LVYPSMGNLV ITKAFVIIIL GGMGSIPGAI
VGGLIIGMAE SFGGFYISTD YKDIIAFLLL VIILSVRPQG LFAGKTA
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