| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3978 |
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| Symbol | livG4 |
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| ID | 4040836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 544634 |
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| End bp | 545398 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979402 |
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| Product | dipeptide/oligopeptide/nickel ABC transporter ATPase |
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| Protein accession | YP_586115 |
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| Protein GI | 94312906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.1221 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00203887 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTTGAGA TCCGCAACCT GACCAAGAAA TTTGGCGGCC TGACCGCGGT ACACGATGTG
TCCGTAAAGT TCGAGACCGG CCATATCAAC GCGATCATCG GTCCCAATGG TGCCGGCAAG
ACGACGTTCT TCAATCTGAT CGCTGGCACC CACGCGCCGA CATCAGGCCA GATCCTGCTC
AAGGGGCAGG ACGTCGCCGG ATTACGCGCG GACCAGATCG CCCGCCTGGG CGTGGCGCGC
ACGTTCCAGG CAACCTCGCT GTTCGACCGG GCGACCGTGC TCGACAATCT GATCGTCGGC
CATCGGCTGC GCACAAAATC CGGGCTGGCC GACGTGCTGT TCAACACGAG CCGCCTGCGC
GAGGAAGAGA AGCTGTGCCG GGAAAAGGCC GAGGCCGCAC TCGATTTCGT CGGGCTGTCA
CACCTCGCGC ATGAACTGGC TGCCGATATC ACCCAGGAGG CGCGCAAGCG CGTGGCGTTC
GCGCTGGCGC TGGCCACCGA CCCCGATCTG CTGCTGCTCG ACGAACCTGC CGGTGGCGTG
AACCCTGAGG AGACGGTCGG CCTTGCCGAA CTGATCCGCA AGATGGTCCG GCACGGCAAA
ACCGTCTGCC TGATCGAACA CAAAATGGAC ATGATCATGC GACTGGCCGA CAAGATCATG
GTGCTCAACT ACGGCGAAAA GATCGCCGAA GGCACGCCGG CGCAGATCCA GCAAGATCCG
CACGTCATCG AGGCCTACCT GGGAGCCGAC CATGTTGCAG CTTGA
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| Protein sequence | MLEIRNLTKK FGGLTAVHDV SVKFETGHIN AIIGPNGAGK TTFFNLIAGT HAPTSGQILL
KGQDVAGLRA DQIARLGVAR TFQATSLFDR ATVLDNLIVG HRLRTKSGLA DVLFNTSRLR
EEEKLCREKA EAALDFVGLS HLAHELAADI TQEARKRVAF ALALATDPDL LLLDEPAGGV
NPEETVGLAE LIRKMVRHGK TVCLIEHKMD MIMRLADKIM VLNYGEKIAE GTPAQIQQDP
HVIEAYLGAD HVAA
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