Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3969 |
Symbol | |
ID | 4040827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 531721 |
End bp | 534027 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637979393 |
Product | signal transduction histidine kinase (cheA) |
Protein accession | YP_586106 |
Protein GI | 94312897 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00140745 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.014071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCCGG AACAGCTCCG TGATGCCTCG TTGCTGGACC TGTTCGCGCT CGAAGCCGAC GCGCAGGCCG ATGTGCTCAA TGCCGGCCTG CTGGCCCTGG AGCGCGATCC CACGGCAGCC GTCCAGCTCG AGGCATGCAT GCGCGCCGCG CATTCGCTAA AAGGGGCCGC GCGCATCGTC GGGCTCGAAG GTGGCGTGCG CGTTGCGCAT GTGATGGAGG ATTGCCTCGT CGCCGCGCAA CGTGGCGGCC TTCTGCTGAG CGCCTCCCAT ATCGATGCAC TGCTGCAAGG CACTGACCTG CTGCAGCGAA TCGGCCATCC GCCCGATGGC AACGCCAATT GGCCGGAGCT TGGCGGCAAG GCAGAGATCG ACGCTTTCGT CGCCCGTCTC GAGGCGCTGC TCGATGGCGG CGCGGATGTG GCGGCACTGG CAGCACCGAC AGTGTTGCCG CCGGCCGCCG AGCCCGCGCC GCCGGAGCCC CCGTTACCCA CGGTCAATCA CCCGTCAACG AGCACCGTCG TCCCGGCGCA GCCACAGGAG TACACCGGCA GCAACCAGGA ACGCATCCTG CGCGTCAATG CCGAACGGCT GGACCGGCTG CTGGCGATGG CCGGCGAGTC GATGGTGGAG ACGCATTGGC TACGGCCGTT CGGAGTTGCG ATCCAGCAGG CCAGGCGTCA ACAGATGCGC GTGATGCAGG CGCTCGATGG CGTTCAGGCG CTGCTCGACA GCCCCGATAG CACCGTGCCA CGCCTGCGGG CGGCACTGAT GGAGACTCGC CAACTGCTTG AGGACAGCCA CGGCCAACTC ACCCAGCGCG TGGAGGAATT CGACCAGTAC GATCACCGCC AAAGTGGACT GTCGCGCCGC CTGTACGACA CGGCGCTGTC GTGCCGGATG CGCCCACTGG CCGATGGCAT CACCGGCTAC TCGCGCATGG TGCGCGACCT GGGCCGCTCG CTCGGCAAGC GTGTCCGACT GGAGTTGTCC GGCGAGCAAA CCCAGGTCGA CCGGGACATC CTGGAGCATC TCGACGCGCC GCTGGCTCAC CTGCTGCGCA ATGCCGTGGA TCATGGCATC GAAGCGCCGG ACACGCGCCG CGCCGCCGGC AAGCCGGAAG AAGGCCGCGT ATCACTCCAT GCGTGGCACA ACGCCGGCCG GCTTGTGATC GAGATCTTCG ATGACGGCGC GGGCGTCGAT CTGGAAGCGT TGCGCGCCGC CATCGTGCGG CGAGGCCTCG CCCAGGCGGA CACCGTCGCG CGGCTATCGC AAGCCGAATT GCTCGAGTTC CTGCTGCTGC CGGGTTTCAG CATGCGCGAG ACCGTTTCCG AGGTCTCCGG CCGCGGTGTC GGGCTCGACG CCGTGCAGGA CATGGTGCGT GCCGTGCGGG GCAGCCTGAG GCTTTCCCAG CAGCCTGGCA GCGGCCTGCA CTTCCATCTC GAGTTGCCCC TGACGCTGTC GATCGTGCGG GCGCTGCTCG TGGAAATATC GGGCGAAGCC TATGCCTTCC CGCTGGGCCA CGTGCTGCGT GCCGTGGCCG TGCGCCGCGA AGACATCGAA CAGACCGAGC AGCACCAGCA CTTCCGCCAC GATGGCAAGC CGGTGGGGCT GATCAGCGCC GCGCAGGTGC TCCAGCGTCC CGAGCGTGGC CAGGATGGAG ATACCGTTCC CGTGGTCGTC ATCGGCGAGC AGGATCGTGT GTATGGCATC GCAGTGGATC GCCTGATCGG CGAGCGATTG CTGGTGGTGC AGCCACTCGC GCAGGCCCTC GGCAAGATCA AGGACATCGC GGCGGGCAGC CTGACCGACG ATGGCATGCC GGTCCTGATC TTCGACGTCG AGGACATGCT GCGGTCGGTG GAGAAACTCG TCTCCGATGG CCGCATCGAA CGGGTGCGCC ACGGCGGCGA GGAAGCCACC CAGACGCGAC GCAAGCGCGT GCTGGTGGTG GATGACTCGC TGACCGTGCG GGAACTGGAG CGCAAGCTGC TGAGCGGACG CGGCTACGAC GTGGCCGTCG CGGTGGACGG CATGGATGGA TGGAACGTGC TCCGCGCGGA ATCGTTCGAT CTGGTGATCA CCGACGTCGA CATGCCACGC ATGGACGGCA TTGAACTCGT CAGCCGGATA CGAGGCGATA CCCGCCTGAC GCATCTCCCC GTGATGATCG TCTCTTACAA GGACCGCGAG CAGGATCGCG AGCGCGGCCT GCAGGCTGGC GCGGATTACT ATCTGGCCAA AGGCAGCTTC CACGATACCG CGCTGCTCGA CGCGGTACGT GACCTGATCG GCGAGGCACG CTCATGA
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Protein sequence | MNPEQLRDAS LLDLFALEAD AQADVLNAGL LALERDPTAA VQLEACMRAA HSLKGAARIV GLEGGVRVAH VMEDCLVAAQ RGGLLLSASH IDALLQGTDL LQRIGHPPDG NANWPELGGK AEIDAFVARL EALLDGGADV AALAAPTVLP PAAEPAPPEP PLPTVNHPST STVVPAQPQE YTGSNQERIL RVNAERLDRL LAMAGESMVE THWLRPFGVA IQQARRQQMR VMQALDGVQA LLDSPDSTVP RLRAALMETR QLLEDSHGQL TQRVEEFDQY DHRQSGLSRR LYDTALSCRM RPLADGITGY SRMVRDLGRS LGKRVRLELS GEQTQVDRDI LEHLDAPLAH LLRNAVDHGI EAPDTRRAAG KPEEGRVSLH AWHNAGRLVI EIFDDGAGVD LEALRAAIVR RGLAQADTVA RLSQAELLEF LLLPGFSMRE TVSEVSGRGV GLDAVQDMVR AVRGSLRLSQ QPGSGLHFHL ELPLTLSIVR ALLVEISGEA YAFPLGHVLR AVAVRREDIE QTEQHQHFRH DGKPVGLISA AQVLQRPERG QDGDTVPVVV IGEQDRVYGI AVDRLIGERL LVVQPLAQAL GKIKDIAAGS LTDDGMPVLI FDVEDMLRSV EKLVSDGRIE RVRHGGEEAT QTRRKRVLVV DDSLTVRELE RKLLSGRGYD VAVAVDGMDG WNVLRAESFD LVITDVDMPR MDGIELVSRI RGDTRLTHLP VMIVSYKDRE QDRERGLQAG ADYYLAKGSF HDTALLDAVR DLIGEARS
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