Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3964 |
Symbol | |
ID | 4040822 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 524537 |
End bp | 526039 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637979388 |
Product | hypothetical protein |
Protein accession | YP_586101 |
Protein GI | 94312892 |
COG category | [S] Function unknown |
COG ID | [COG3333] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.454339 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0362473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTGT TTGACCATCT TGCCCTGGGC TTCTCCACGG CATTGTCGCT GCAAAACCTC GCGTACGCGT TCCTGGGCTG CGTGCTCGGG ACGCTGATCG GCGTGCTTCC GGGCCTTGGG CCTCTGGCAA CCATCGCCAT GCTGCTGCCG GTGACGTACT CGCTGCCGCC GGTGGCCGCG CTGATCATGC TGGCCGGTAT TTACTACGGT GCGCAGTATG GCGGTTCGAC CACCGCTATT CTGGTGAACC TGCCGGGCGA ATCGTCGTCG GTGGTGACCA CGATCGACGG CTACCAGATG GCACGTCGTG GCCGCGCCGG TGTGGCGCTG GCTACTGCTG GCCTTGGTTC GTTCTTCGCT GGCTGCGTGG CCACGCTGAT CCTGGCTGCG TTCGCTACAC CGCTGTCGGA ACTGGCGTTC AAGTTCGGTC CCGCCGAGTA CTTCTCGCTG ATGGTGCTGG GCCTGATCGG CGCCGTGGTG CTGGCTTCGG GCTCGCTGCC GAAGGCCGTG GCGATGATTG TGCTGGGTCT GCTGATGGGC CTGATCGGTA CCGACGTGAA CTCGGGCGCC GCGCGCTTCT CGTTCGACGT GCCTGAACTG ACCGACGGCA TCGACTTCGT GGCACTGGCC ATGGGTATGT TCGGCTTCGC GGAAATCATC GCGAACCTCG AGCAGAAGGA AGCCCGTGAG ACGTTCACGA ACAAGGTCAC GAACCTGTGG CCGACCAAGG AAGACTTCAG GCGCATGATT CCGGCCGTGC TGCGTGGCAC GGCGCTGGGT TCGGCACTGG GTATCCTGCC GGGTGGCGGT GCTGCGCTGG CTTCGTTTGC GGCCTACTCG CTGGAAAAGA AGACGTCGAA GTACGCTCAC GAGTTCGGCA AGGGTGCGAT CGAAGGCGTG GCAGGTCCGG AATCGGCCAA CAACGCCGCT GCCCAGACCT CGTTCATCCC GCTGCTGACG CTGGGCATTC CGCCCAACGC CGTGATGGCG CTGATGGTCG GTGCGATGAC GATCCACAAC ATCCAGCCTG GTCCGCAGGT GATGAGCAGC AACCCTGCGC TGTTCTGGGG CCTGATCGCT TCGATGTGGA TCGGCAACCT GATGCTGATC ATCCTGAACC TGCCGATGAT TGGCGTGTGG GTGAAGCTGC TGACCGTGCC GTATCGCTTC CTCTACCCGG CGATTCTGGT CTTCTGCTGC ATCGGCGTGT ACTCGGTGAA CAACCAGACG TTCGACGTGT TCATGGCTGC CGCTTTCGGC GTGATCGGTT ACCTGTTCCT GAAGCTGAAG TGCGAACCGG CACCGCTGCT GCTGGGCTTC GTGCTCGGAC CGATGATGGA AGAGAACTTC CGCCGCTCGC TGCTGCTGTC GCGTGGTGAC TTCACCGTGT TCGTGACGCG TCCGCTGTCG ATGGGCCTGC TGATCGCCGC TGCCGCACTG GTGGCCGTGG TGGCACTGCC GTCGATCAAG GCGAAGCGCG AAGAAGCGTT CCAGGAAGAG TAA
|
Protein sequence | MELFDHLALG FSTALSLQNL AYAFLGCVLG TLIGVLPGLG PLATIAMLLP VTYSLPPVAA LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTTIDGYQM ARRGRAGVAL ATAGLGSFFA GCVATLILAA FATPLSELAF KFGPAEYFSL MVLGLIGAVV LASGSLPKAV AMIVLGLLMG LIGTDVNSGA ARFSFDVPEL TDGIDFVALA MGMFGFAEII ANLEQKEARE TFTNKVTNLW PTKEDFRRMI PAVLRGTALG SALGILPGGG AALASFAAYS LEKKTSKYAH EFGKGAIEGV AGPESANNAA AQTSFIPLLT LGIPPNAVMA LMVGAMTIHN IQPGPQVMSS NPALFWGLIA SMWIGNLMLI ILNLPMIGVW VKLLTVPYRF LYPAILVFCC IGVYSVNNQT FDVFMAAAFG VIGYLFLKLK CEPAPLLLGF VLGPMMEENF RRSLLLSRGD FTVFVTRPLS MGLLIAAAAL VAVVALPSIK AKREEAFQEE
|
| |