Gene Rmet_3964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3964 
Symbol 
ID4040822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp524537 
End bp526039 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content63% 
IMG OID637979388 
Producthypothetical protein 
Protein accessionYP_586101 
Protein GI94312892 
COG category[S] Function unknown 
COG ID[COG3333] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.454339 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0362473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGT TTGACCATCT TGCCCTGGGC TTCTCCACGG CATTGTCGCT GCAAAACCTC 
GCGTACGCGT TCCTGGGCTG CGTGCTCGGG ACGCTGATCG GCGTGCTTCC GGGCCTTGGG
CCTCTGGCAA CCATCGCCAT GCTGCTGCCG GTGACGTACT CGCTGCCGCC GGTGGCCGCG
CTGATCATGC TGGCCGGTAT TTACTACGGT GCGCAGTATG GCGGTTCGAC CACCGCTATT
CTGGTGAACC TGCCGGGCGA ATCGTCGTCG GTGGTGACCA CGATCGACGG CTACCAGATG
GCACGTCGTG GCCGCGCCGG TGTGGCGCTG GCTACTGCTG GCCTTGGTTC GTTCTTCGCT
GGCTGCGTGG CCACGCTGAT CCTGGCTGCG TTCGCTACAC CGCTGTCGGA ACTGGCGTTC
AAGTTCGGTC CCGCCGAGTA CTTCTCGCTG ATGGTGCTGG GCCTGATCGG CGCCGTGGTG
CTGGCTTCGG GCTCGCTGCC GAAGGCCGTG GCGATGATTG TGCTGGGTCT GCTGATGGGC
CTGATCGGTA CCGACGTGAA CTCGGGCGCC GCGCGCTTCT CGTTCGACGT GCCTGAACTG
ACCGACGGCA TCGACTTCGT GGCACTGGCC ATGGGTATGT TCGGCTTCGC GGAAATCATC
GCGAACCTCG AGCAGAAGGA AGCCCGTGAG ACGTTCACGA ACAAGGTCAC GAACCTGTGG
CCGACCAAGG AAGACTTCAG GCGCATGATT CCGGCCGTGC TGCGTGGCAC GGCGCTGGGT
TCGGCACTGG GTATCCTGCC GGGTGGCGGT GCTGCGCTGG CTTCGTTTGC GGCCTACTCG
CTGGAAAAGA AGACGTCGAA GTACGCTCAC GAGTTCGGCA AGGGTGCGAT CGAAGGCGTG
GCAGGTCCGG AATCGGCCAA CAACGCCGCT GCCCAGACCT CGTTCATCCC GCTGCTGACG
CTGGGCATTC CGCCCAACGC CGTGATGGCG CTGATGGTCG GTGCGATGAC GATCCACAAC
ATCCAGCCTG GTCCGCAGGT GATGAGCAGC AACCCTGCGC TGTTCTGGGG CCTGATCGCT
TCGATGTGGA TCGGCAACCT GATGCTGATC ATCCTGAACC TGCCGATGAT TGGCGTGTGG
GTGAAGCTGC TGACCGTGCC GTATCGCTTC CTCTACCCGG CGATTCTGGT CTTCTGCTGC
ATCGGCGTGT ACTCGGTGAA CAACCAGACG TTCGACGTGT TCATGGCTGC CGCTTTCGGC
GTGATCGGTT ACCTGTTCCT GAAGCTGAAG TGCGAACCGG CACCGCTGCT GCTGGGCTTC
GTGCTCGGAC CGATGATGGA AGAGAACTTC CGCCGCTCGC TGCTGCTGTC GCGTGGTGAC
TTCACCGTGT TCGTGACGCG TCCGCTGTCG ATGGGCCTGC TGATCGCCGC TGCCGCACTG
GTGGCCGTGG TGGCACTGCC GTCGATCAAG GCGAAGCGCG AAGAAGCGTT CCAGGAAGAG
TAA
 
Protein sequence
MELFDHLALG FSTALSLQNL AYAFLGCVLG TLIGVLPGLG PLATIAMLLP VTYSLPPVAA 
LIMLAGIYYG AQYGGSTTAI LVNLPGESSS VVTTIDGYQM ARRGRAGVAL ATAGLGSFFA
GCVATLILAA FATPLSELAF KFGPAEYFSL MVLGLIGAVV LASGSLPKAV AMIVLGLLMG
LIGTDVNSGA ARFSFDVPEL TDGIDFVALA MGMFGFAEII ANLEQKEARE TFTNKVTNLW
PTKEDFRRMI PAVLRGTALG SALGILPGGG AALASFAAYS LEKKTSKYAH EFGKGAIEGV
AGPESANNAA AQTSFIPLLT LGIPPNAVMA LMVGAMTIHN IQPGPQVMSS NPALFWGLIA
SMWIGNLMLI ILNLPMIGVW VKLLTVPYRF LYPAILVFCC IGVYSVNNQT FDVFMAAAFG
VIGYLFLKLK CEPAPLLLGF VLGPMMEENF RRSLLLSRGD FTVFVTRPLS MGLLIAAAAL
VAVVALPSIK AKREEAFQEE