| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3963 |
|---|
| Symbol | |
|---|
| ID | 4040821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 524029 |
|---|
| End bp | 524523 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637979387 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_586100 |
|---|
| Protein GI | 94312891 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.511575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0273458 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGCAAT TCACAACCTT GAGGAGAATC GTTTTGCGCA TACGCAGCCA AAAGGACTTT
GCCTCCGGCC TGATGTTTAT TCTGGTCGGT CTGGGCTTTT CCTTCGTCGC GCGCGGCTAC
AGCATGGGGA CGGCCGCCAA GATGGGCCCC GGTTACTTTC CGTTCCTGCT TGGCCTAGTA
CTGGCCATCC TGGGCGCGCT AGTGTTGATG GGGTCGTTGT CGTCGAAGGG TGAGGAAGAT
CAACTTGCCC GCTGGGATCT GAAGACGCTT CTGTGGATTC TCGGCTCCGT CGTGCTGTTC
GGCCTGTTGC TCAAGCCGCT CGGCATGGTG CTGTCGGTGT TCGTGCTGGT GATGGTGTCG
TCGATGGCCA GCCATGAGTT CAGCTGGAAG GGTGCCCTGC TCAACAGCGT GGTGCTCGTG
CTGATCGCCC TGGGCGCCTT CGTGTACGGC ATCAACCTGC AGATGCCGGT CTGGCCTGCC
TTCATTACCG GCTAA
|
|---|
| Protein sequence | MPQFTTLRRI VLRIRSQKDF ASGLMFILVG LGFSFVARGY SMGTAAKMGP GYFPFLLGLV
LAILGALVLM GSLSSKGEED QLARWDLKTL LWILGSVVLF GLLLKPLGMV LSVFVLVMVS
SMASHEFSWK GALLNSVVLV LIALGAFVYG INLQMPVWPA FITG
|
|---|
| |