| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3950 |
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| Symbol | |
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| ID | 4040808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 507040 |
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| End bp | 508350 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637979374 |
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| Product | major facilitator protein family permease |
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| Protein accession | YP_586087 |
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| Protein GI | 94312878 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCT CCAGCAGTAC TGCCGGGGCT TCGGGTGCGC AAGGCGGCCA TGCCGCTCGC
CCGCTGACCG GTCAGGATTA CAAGACGCTC GCGCTTGCCG CACTTGGCGG CGCGCTCGAG
TTCTACGATT TCATTATTTT TGTTTTCTTC GCCAAGGTCA TTGGCCAGTT ATTCTTCCCG
GCATCCGTGC CGGACTGGCT GCGCATGCTG CAGACCTTCG GCATCTTCGC GGCCGGCTAC
CTGGCACGCC CGCTGGGCGG CATCATCATG GCGCACTTCG GTGACCTGCT CGGCCGCAAG
AAAATGTTTA CGTTGTCGAT TCTGCTGATG TCGGTACCGA CGCTGCTGAT GGGCCTTCTG
CCGACCTACG CTTCGGTGGG CCTGCTGGCG CCGATGGCGC TGCTGGTGCT GCGCATCCTG
CAGGGTGCCG CCGTGGGCGG CGAAGTCCCC GGCGCATGGG TGTTCGTGTC CGAACACGTG
CCCCGGCGTC ACGTCGGATA TGCCTGCGGC ACGCTGACTG CAGGTCTGAC GGCCGGCATC
CTGCTCGGCT CGCTGGTAGC CACAGGCATC AACGCCGTAT TCGATCCGCA GGAACTCGTT
GACCATGGCT GGCGCGTGCC GTTCGTGCTG GGCGGCGTGT TCGGTGTCGG CTCGATGTAC
CTGCGCCGCT GGCTCCATGA AACCCCGGTC TTCGCGGAAC TGCAGCAACG CAAGGCGCTG
GCCGCCGAAC TGCCGCTCAA GACGGTCGTG CGCGACCACC GCGGCGCCGT TGTCATCTCG
ATGCTGCTCA CGTGGATGCT GTCCGCTGGC ATCGTGGTGG TGATCCTGCT GACGCCGACC
TACCTCCAGA CGCTGTACGG CTTCGACGCC CGCACCGCGC TGGTGGCCAA CAGCGCCGCA
ACGCTGTGCC TGTCGATCGG CTGCGTGGTG GCCGGCATCC TGGCTGACCG CATTGGCGCG
CGCCTGACAC TTTCGATCGG TGGCGCACTG CTGGCTGCCA CGGCCTGCGT GCTGTACACG
ACGATCGGCA CCCGTCCCGA CCTGCTGCTG CCGCTGTACG CCCTGGCCGG CTTCTTCGTC
GGCACGATTG GCGCCGTGCC TTACGTGCTG GTGCACGCGT TCCCAGCGCA AGTGCGGTTC
TCCGGGCTGT CCTTCTCGTA CAACGTCTCG TACGCGATCT TCGGCGGACT GACGCCGGTG
ATCGTCTCGC TGATGCTCAA GAATGATTCG CTGGCCCCGG CCCACTATGT GGTTGGCGTC
TGCATCATGG GTATCGTGAC GGCGCTGTTC GTACGCAAGC GGCACGCCTG A
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| Protein sequence | MSTSSSTAGA SGAQGGHAAR PLTGQDYKTL ALAALGGALE FYDFIIFVFF AKVIGQLFFP
ASVPDWLRML QTFGIFAAGY LARPLGGIIM AHFGDLLGRK KMFTLSILLM SVPTLLMGLL
PTYASVGLLA PMALLVLRIL QGAAVGGEVP GAWVFVSEHV PRRHVGYACG TLTAGLTAGI
LLGSLVATGI NAVFDPQELV DHGWRVPFVL GGVFGVGSMY LRRWLHETPV FAELQQRKAL
AAELPLKTVV RDHRGAVVIS MLLTWMLSAG IVVVILLTPT YLQTLYGFDA RTALVANSAA
TLCLSIGCVV AGILADRIGA RLTLSIGGAL LAATACVLYT TIGTRPDLLL PLYALAGFFV
GTIGAVPYVL VHAFPAQVRF SGLSFSYNVS YAIFGGLTPV IVSLMLKNDS LAPAHYVVGV
CIMGIVTALF VRKRHA
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