Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3949 |
Symbol | phaZ3 |
ID | 4040807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 505863 |
End bp | 506936 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979373 |
Product | poly(3-hydroxybutyrate) depolymerase |
Protein accession | YP_586086 |
Protein GI | 94312877 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | [TIGR01840] esterase, PHB depolymerase family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.994388 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAA GCCTCTCTCC GGACTGGGAT GCGCAGCTTC GACAAATTCG TCGCGCGCAG TTTCAGCCCG CGAAACAAAT TCGTACATGG CTGGAGCGTC TGGAACTGGC GCCCCCAGCC ACTCATCGCC AGCGCCACAC CGCGCCAGGC GAGGCCGGGC CGGCTGAATT GCCAGGCAAC TGGCAGTCGC TGAATCTGGG CCTGACGCCG TTACCCGGCG AACTGGTCCC GCAACTCTCG TACCGCCTCT ATATCCCGTC CGGCGCCAAG GGCGCATTGC CTGTCGTGGT GATGCTGCAC GGATGTCAGC AAACGCCTGA AGCCCTGGCG GCTGGCACGC GCATGAACGC GCTGGCCGAG CGCGAAGGAT TCATGGTGGC TTATCCGCAG CAGCCATTGC GGCGCTCCGT GCATCGGTGC TGGCAGTGGT TCGACCTCGC GGCCGGGCAG GGCGGGCGCG AAGCACAGGC GCTGGCACTG CTGATCGACG AACTGGCAAC CCGGCCCGAC GTACGTATCG GCGAGATCTA CCTTGCCGGG TTGTCGGCCG GTGCCGCGAT GGCGGCTCTG GTGGCGTTGC GCTACCCGGA CAAGGTCGCT GCCGTGGGAT TGCACTCCGG TGTGGTGATC GGTGCGGCCG ATTCGCCCCG GGCGGGCCTG AGGGCGATGC ACGAGGGCTC GGCGATCGAG CCCGCGCTAT TGCTCGATGC TGCTGGCGTG ACGCCCGGCG GTCCGGCCAT GCCGGCCATC GTGTTGCACG GCATGGCGGA CGAAGCGGTG CATCCGATCA ACGGGCGTTT GTTGACGCAG CAGTTCCTGG CCTACAACGG CCTGGGTGGC AGCCTCGGCG GACAGATCGA AAGCGCTAAC GATGCGCCGC TGGGCAAGGA TGGCGAAGTT CGCGAAGCGC GCTTTGGCCG CTGGAATCGC GATCTGGTCC GACTGGTGGA AGTGGGGGGG CTGGGTCATG CCTGGAGTGG CGGCGATGCC ACGGTACCGT ACCACAGCAG CATCGGCCCG GATGCGAGCT GGCTGATATG GCAATTTCTC CGTCAGCACA AGCGGGCGGC GTGA
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Protein sequence | MAKSLSPDWD AQLRQIRRAQ FQPAKQIRTW LERLELAPPA THRQRHTAPG EAGPAELPGN WQSLNLGLTP LPGELVPQLS YRLYIPSGAK GALPVVVMLH GCQQTPEALA AGTRMNALAE REGFMVAYPQ QPLRRSVHRC WQWFDLAAGQ GGREAQALAL LIDELATRPD VRIGEIYLAG LSAGAAMAAL VALRYPDKVA AVGLHSGVVI GAADSPRAGL RAMHEGSAIE PALLLDAAGV TPGGPAMPAI VLHGMADEAV HPINGRLLTQ QFLAYNGLGG SLGGQIESAN DAPLGKDGEV REARFGRWNR DLVRLVEVGG LGHAWSGGDA TVPYHSSIGP DASWLIWQFL RQHKRAA
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