| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3936 |
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| Symbol | |
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| ID | 4040794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 494024 |
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| End bp | 495670 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979360 |
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| Product | putative drug resistance transporter |
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| Protein accession | YP_586073 |
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| Protein GI | 94312864 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGG AATTTCGCCC TGAGCAGGAT GTATCACCTG GCAGGGCAGT AGCAGGATCA
CCGGCCAACC AGTCGGTGAG GAAAGGGCAG GTCCTGCCCT TTCGCGAGTC TTTGCTTGCG
ATGACCGGCA TCGCATTTGT CGTGATGCTG GTTGCACTTG ACCAGACCGT GGTCAGTACC
GCGCTGCCAA CCGTGGTGGC GGAGTTGCAG GGCTTCGAGT TTTACGCATG GGTGGCTACG
GCCTACCTGC TGACGTCGGT CATTACCGTG CCCATCTTCG GGCGACTCGG GGACTATTAC
GGACGCAAGC CGTTTGTGCT GGCCTCGATC GTCGTGTTCG TGGCGGCATC GGCGCTTTGC
GGCATGGCTA CGAACATGCC GTTCCTGGTA GCTGCCCGCG CATTGCAGGG GATCGGTGGT
GGCATGTTGG TCGGCACGGC GTTCGCCTGC GTTCCCGATC TGTTTCCTGA CCCGCATGTG
CGCTTGCGTT GGCAGGTCAT GATGAGCACG GCGTTCGGCT TGGCCAATGC GATCGGCCCG
TCGTTGGGCG GTGTGCTGAC TGAGTGGTTC GGATGGCGAG CGGTGTTCTA CATCAACCTG
CCGGTTGGCT TGCTGGGGTT GCTGATTGCC TGGCGCTTCC TGCCGCATTT GCGTCATCAG
TCGCATACCG AGCCAATCCG TATCGACTGG GCTGGCGCCG CACTAATCGC GGCAGGGCTG
GGTAGTTTGC AACTATCGGT GGAGTGGCTG CCTGAACGGG GGCTTGGCGT TGTGACGATC
GGCCTGATGG TCTTCTCCAT CGCCGCGTTC GTAGCGCTGT GGCATTGGTC GCGTAAATCA
GCGAATCCGA TTCTGCCGTT CGACATGTTC CGCAATCCGA GCCTTGCGTC GCTGTTCGTG
CTTTCCGTGC TGGCGGGCTT CACGATGTTC GGCTTGCTGC TGTACGCACC GTTGCTGTTC
CAGGGCGGGT TTGGCTATTC GCCGAAGGAG GCCGGGCTGC TGGTGACGCC GCTGGTCGTA
TGCATCACGA TCGGATCTAT TGTGAACGGC CGCATCATCA CCCGGATCCC GCGCCCCAAT
GCCATGCTTT ACGCGGGATT CACGATGCTG GCGCTGGCGC TGCTGGGTCT CTCGCAGGCG
ACGCGCGGTA TGCATCACAA TCTGCTGCTT TCGATCATGT TGCTGGCAGG GCTCGGACTG
GGCTTTGTCC TGCCCAACCT GACGGTATTC GCCCAGCAGA CCGCCGGTCG TGCCCATCTC
GGCATCGCTA CGGCGATGCT TCAGTCGCTG CGGATGGTCG GCGGGATGGT AGGGACGGCA
CTGGTTGGCA CGCTGGTCAC GCGCAGCTAC ACGTCTGGCG TGACGTCGGC GCTGGCTGCC
GCCAATGCGA CGGATTGGAC TGCCAGGATG ACCGACCCGC AGATCCTGAT CGACAAGGCC
GCGCAGGCAG AATTGCTGAC CAATTTGCAG CAGGCAGGGC ACAATGGAGC CCTGCTGCTG
GAACAGGCGC GGGTGTCCCT CGTCGGCGCC ATCCATCTTG GCCTGTTGCT GGCGGCAATC
GCTGCATTGT TCGGTGTCTG GCGCGCGCGC CGGGTTCCGC CGATCAAATT GATGCGGGTA
AATGAACCCG TGATGGCTGC GGACTGA
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| Protein sequence | MTSEFRPEQD VSPGRAVAGS PANQSVRKGQ VLPFRESLLA MTGIAFVVML VALDQTVVST
ALPTVVAELQ GFEFYAWVAT AYLLTSVITV PIFGRLGDYY GRKPFVLASI VVFVAASALC
GMATNMPFLV AARALQGIGG GMLVGTAFAC VPDLFPDPHV RLRWQVMMST AFGLANAIGP
SLGGVLTEWF GWRAVFYINL PVGLLGLLIA WRFLPHLRHQ SHTEPIRIDW AGAALIAAGL
GSLQLSVEWL PERGLGVVTI GLMVFSIAAF VALWHWSRKS ANPILPFDMF RNPSLASLFV
LSVLAGFTMF GLLLYAPLLF QGGFGYSPKE AGLLVTPLVV CITIGSIVNG RIITRIPRPN
AMLYAGFTML ALALLGLSQA TRGMHHNLLL SIMLLAGLGL GFVLPNLTVF AQQTAGRAHL
GIATAMLQSL RMVGGMVGTA LVGTLVTRSY TSGVTSALAA ANATDWTARM TDPQILIDKA
AQAELLTNLQ QAGHNGALLL EQARVSLVGA IHLGLLLAAI AALFGVWRAR RVPPIKLMRV
NEPVMAAD
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