| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3915 |
|---|
| Symbol | |
|---|
| ID | 4040768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 462744 |
|---|
| End bp | 463556 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637979334 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_586052 |
|---|
| Protein GI | 94312843 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1414] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.504106 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.604915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATGA ACACGCCAGT CGAACAATTC ATTGCCGAGC GCCGCCGCGA AGATCCTTCG
TTCGGTGGGC TGTTGGCCAA GGGTTTCGCG CTGCTTCGCT GCTTCATCGA CGACCCTCGC
CCATTGGGCA ACGGAGAACT GGCGCAGCGG CTGCAGTTGC CGCGGGCCAC GGTATCGCGC
ATCTGCCGCA CGTTGTTCGA ACTCGGCTAC CTCGACTGGG AACCGAAGCT GGACAAGTAC
TTCGTCAGCG CCCAGGTGCT GGCGCTGGGC TATCCGTACA TGGCTGGACT GCAGGTCCGC
CACCTGGCAC GACCGCTGAT GCAGGCGCTG GCCAATCAGA TCGAAGGCGC GGTGTCGATG
GGCGTGGCCT ACCGGCTCGA CGTGACTTAC CTGGAATCGT GCACGCACAT GGAAGGCACG
CCGGCGCGGC CGGCGATTGG CGCGGTGCGG TCGGTGCTGA CGAGCGCGAT GGGGCGCGCG
TACCTGTGCA CGCTGTCGAA GACCGAATTC GAGAAACTGA TGACCACGGC GCGTGCAGAG
CGACCCGATG AGTACGCCGC CTGCTACGAG ACCTTGTGCC ACTGCATCGC CCACTATCCG
AAGCGCGGAT TCACGCTCAA CGAGGGGGAT GCGGGAGCGG ATGTACATGG CGTGGGGGTG
TATTCGCGCG TGGTGTACAT GAACCGGCCG CTGCTGTTCA ACTGCGCCAT CCCCGGGATG
CGCGTCAAGC GGGGCTCGAT GGAGAAGCGC GTGGCGCCGC TGCTGCGCGA GATGGTGCGA
TCGATAGAAA ACATGGCTGG CGTGGGACGC TAG
|
|---|
| Protein sequence | MQMNTPVEQF IAERRREDPS FGGLLAKGFA LLRCFIDDPR PLGNGELAQR LQLPRATVSR
ICRTLFELGY LDWEPKLDKY FVSAQVLALG YPYMAGLQVR HLARPLMQAL ANQIEGAVSM
GVAYRLDVTY LESCTHMEGT PARPAIGAVR SVLTSAMGRA YLCTLSKTEF EKLMTTARAE
RPDEYAACYE TLCHCIAHYP KRGFTLNEGD AGADVHGVGV YSRVVYMNRP LLFNCAIPGM
RVKRGSMEKR VAPLLREMVR SIENMAGVGR
|
|---|
| |