| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3913 |
|---|
| Symbol | |
|---|
| ID | 4040766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 460795 |
|---|
| End bp | 461793 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637979332 |
|---|
| Product | extra-cytoplasmic solute receptor |
|---|
| Protein accession | YP_586050 |
|---|
| Protein GI | 94312841 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.107287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.463561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA CCATTCCGCC ACGACGACGA TGGGTCATGC GCGCCGCATG CGCCGCTGTG
GCACTGCTGC CGCTGGCTAC GTTCGCGCAG GGGAGCTATC CGTCCAAGCC GATCCGGATG
GTCGTGCCGT ATCCGGCCGG CGGATTGACT GACACAGTGG CCCGGCAATT GGCCGAAGGC
CTTGGCAAGC GCCTTGGGCA GCCGGTGGTG GTCGAAAACC GGGGTGGCGC GGGCGGCATC
ATCGGCACGG ACTTCGTCGC CAAGTCGCCG GCTGACGGCT ACACACTGCT GATGACGATT
CCGGGTCCGA TCACGGCCAA TATCGCGCTG TACAAGAAGC TCCCGTACGA CCCCCGTACC
GAACTGCGGC CCATCTCCGA CGTGGCCATG GCCCGCACGG TGCTGACCGT CAATTCGGCC
GTGCCGGTGA AGACCGTGAC CGAGCTGATT GCCTACGCGA AGAAGGAACC GGGCAAGCTG
CGCATGGGCT CCTGGGGTCC GGGCACGCAA CCGCACACGA TCCAGGCGTA CATGGACAAG
ACCTACGGGG TCGATATCCT GCACGTTCCC TATCGCGGCG AAGGGCCGAT GGTGACCGAC
TTGCTCGCCG GACAGGTCAA CCTGACGATC GGATCCGTGA CCACGCTGCG CCAGTACATT
GCGGTCGGCA AGCTCCGACC GCTGGCCGTG GCGGGCACCA CCCGCGCGAA GGCATTGCCG
GATGTGCCGA CGTTCACGGA GGCCGGCTAC AGCGATGCCG CCTACAAGAT CGTTGGCCCG
ACCACGCTGC TGGCGCCGGC AAAGACACCG GATGCGATCA TCGAACGGCT GGGCCGCGAG
GTCAGCGCGC TGGTGAAGTC ACCAGAACTG AGCGCGAAGA TCGACGAATT GGGCGCGGAA
CCGATCGGCA ACACGCCGGC TGAAGCCGAG CGCGCGTACA AGGCCTATCT GCCAGTGGTG
CTCAAACTGA CGGCGGATAC TGGTGTGACG CTCGACTGA
|
|---|
| Protein sequence | MKQTIPPRRR WVMRAACAAV ALLPLATFAQ GSYPSKPIRM VVPYPAGGLT DTVARQLAEG
LGKRLGQPVV VENRGGAGGI IGTDFVAKSP ADGYTLLMTI PGPITANIAL YKKLPYDPRT
ELRPISDVAM ARTVLTVNSA VPVKTVTELI AYAKKEPGKL RMGSWGPGTQ PHTIQAYMDK
TYGVDILHVP YRGEGPMVTD LLAGQVNLTI GSVTTLRQYI AVGKLRPLAV AGTTRAKALP
DVPTFTEAGY SDAAYKIVGP TTLLAPAKTP DAIIERLGRE VSALVKSPEL SAKIDELGAE
PIGNTPAEAE RAYKAYLPVV LKLTADTGVT LD
|
|---|
| |