Gene Rmet_3894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3894 
Symbol 
ID4040747 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp438179 
End bp439204 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID637979313 
Producthypothetical protein 
Protein accessionYP_586031 
Protein GI94312822 
COG category[S] Function unknown 
COG ID[COG2990] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0831211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.569871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATGAAC CAGTGTCGTA CTTGCAGGGG CTCGTCCACG CCCGTGCGGG GGGGCTTGTT 
GACCTTTATC CGGCGTACTA CCTGCGATAT CTCGCTTCCG TAGCGTCGAT ATCCGCTTTC
TGTTATCCGG CGGGCAGCCG CAAGTGGTTG ACGCGACGTG CCAAGCTGAT TGCGCTGTCG
GCCGTGCGGG CCGGTTCGGC GCGGTCGTGG CTGCGCGCCG CAGCTGCCTC GCCGCTGCTG
CAGCGGGTGG TGGTGGCGCG GCCGTTGATG CTGGAGAAGC CATTCCGGCC GCTTGGCGCG
CTGGGTCTGG GCTTTGGTGA CCGGGCGAGG TTGGTGGTGG ACCACTACGT GCTGGCCGAA
TCCGCACTGC CCGTTTGCGT CTGCGATCGA ATCTATCTGT CCGGCGGACT CCGGTGGATG
TCCGAGGATG GGCGCTACGA GCTTCGCCTG GCCGATTCCG GCCCGAATCC CAAGGAAGGC
GAACTGGCTT TCTACTGGAC CGATATCGAG ACCGGGGTTT GCCTGACGCA GCTGAGCTTC
TATCTCAGGC GTGGCGACCA CGGCCCGGAA ATCTATGTCG GCGGCCTGCA GGGGCCGATG
GGCGAGCAGA GCCGTGAATG GATTCGCCTT GCCACCAAGG CCAGCGAAGG CCTGCGGCCC
AAGGATGTCG TGATGGAGGC GTTGCTGGCG TTCGCCGCAC ACGTTGGCGC CCGGCGTGTG
GTGGGGGTGT CCCGCGCCAA TCACGTTAGC AGGCAACGCA ACACACCGCG TGAAATCCTG
GCTGACTACG AAGGCTTCTG GGCGGAGTAC CACGGCACGT CGCTTGCGGA TGGCAACGTC
GATGTGCCGA TCTGCCAGCC ACAACGCGAT ATTGCGGAGA TTCCTTCCAA GAAGCGGTCG
GCCTGGCGCC GCAAGCAGGC ATTTGCCGAA GCGGTGCGCG CGACGGTGGC GGACTGGCTG
CGTGCCGACG CAGTCCCCGC CGGCAACGAT CCCCAACTTC CTGTTGCCGC AGCTGTCGCT
GCCTGA
 
Protein sequence
MHEPVSYLQG LVHARAGGLV DLYPAYYLRY LASVASISAF CYPAGSRKWL TRRAKLIALS 
AVRAGSARSW LRAAAASPLL QRVVVARPLM LEKPFRPLGA LGLGFGDRAR LVVDHYVLAE
SALPVCVCDR IYLSGGLRWM SEDGRYELRL ADSGPNPKEG ELAFYWTDIE TGVCLTQLSF
YLRRGDHGPE IYVGGLQGPM GEQSREWIRL ATKASEGLRP KDVVMEALLA FAAHVGARRV
VGVSRANHVS RQRNTPREIL ADYEGFWAEY HGTSLADGNV DVPICQPQRD IAEIPSKKRS
AWRRKQAFAE AVRATVADWL RADAVPAGND PQLPVAAAVA A