Gene Rmet_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3889 
Symbol 
ID4040742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp433745 
End bp434467 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637979308 
Productputative transcriptional regulator 
Protein accessionYP_586026 
Protein GI94312817 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.570531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTGA CACAAGCGCT CCCCAAAACC GCCCGGCTCC GCACGCTGGG CATGTCCGCC 
GAGATCGCGG CGCGGTTGCG CACGATGATT CAGGAAGGCG AGCTGCCGCC GGGCGTGCGG
ATCGACGAGA AGGCCTTCTG CGAGGCCTTC GATGTGTCGA AGACGCCGTT GCGCGAAGCG
CTGAAGGTGC TGGTGGCCGA GGGGCTGGTC CTGCATCGCC AGTACATCGG CTATCGCGTG
GCGCCGCTCG ATCTCGACGA ACTGCGCGCC ACATTCGAGA CGTTGCACGG GCTGGAGGCA
CATGCCGGGG AACTGGCGGC GCAGCGGCTC AGCGATGCAG CCGTGACCAA GATCGAACGT
CGCCATCAGG CCATGATCGA CGCGCACGAC GCCGGACGCC GCACTGACTA CTTCCGCATC
AACCAGGAAA TCCACCAGCT CATCATCGAC GGTGCCGGCA ACGCCGTGCT GGCCGGCATC
TATGCAATGC TGATGAGCAA GGTCCACCGC GCCCGTGGCG CGGCCAACGC GGACATGCTG
CGCTGGCAGG AATCGCATAC CGAGCACGAG GAGATCATCG CGGCGCTGCG CGAGCCGGGG
CGTCCGCGCC TGGCCGACGT GCTGCGACGG CATTCGGAGA ACACTGCGAA GGAAGTACTG
CGCGTGGTCG AGCAGACGCT GGCCGAGCCC GCGGCGCGCG CGGCGGGTGG CGCGCGGCGC
TGA
 
Protein sequence
MSVTQALPKT ARLRTLGMSA EIAARLRTMI QEGELPPGVR IDEKAFCEAF DVSKTPLREA 
LKVLVAEGLV LHRQYIGYRV APLDLDELRA TFETLHGLEA HAGELAAQRL SDAAVTKIER
RHQAMIDAHD AGRRTDYFRI NQEIHQLIID GAGNAVLAGI YAMLMSKVHR ARGAANADML
RWQESHTEHE EIIAALREPG RPRLADVLRR HSENTAKEVL RVVEQTLAEP AARAAGGARR