Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3889 |
Symbol | |
ID | 4040742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | + |
Start bp | 433745 |
End bp | 434467 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637979308 |
Product | putative transcriptional regulator |
Protein accession | YP_586026 |
Protein GI | 94312817 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.570531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTGA CACAAGCGCT CCCCAAAACC GCCCGGCTCC GCACGCTGGG CATGTCCGCC GAGATCGCGG CGCGGTTGCG CACGATGATT CAGGAAGGCG AGCTGCCGCC GGGCGTGCGG ATCGACGAGA AGGCCTTCTG CGAGGCCTTC GATGTGTCGA AGACGCCGTT GCGCGAAGCG CTGAAGGTGC TGGTGGCCGA GGGGCTGGTC CTGCATCGCC AGTACATCGG CTATCGCGTG GCGCCGCTCG ATCTCGACGA ACTGCGCGCC ACATTCGAGA CGTTGCACGG GCTGGAGGCA CATGCCGGGG AACTGGCGGC GCAGCGGCTC AGCGATGCAG CCGTGACCAA GATCGAACGT CGCCATCAGG CCATGATCGA CGCGCACGAC GCCGGACGCC GCACTGACTA CTTCCGCATC AACCAGGAAA TCCACCAGCT CATCATCGAC GGTGCCGGCA ACGCCGTGCT GGCCGGCATC TATGCAATGC TGATGAGCAA GGTCCACCGC GCCCGTGGCG CGGCCAACGC GGACATGCTG CGCTGGCAGG AATCGCATAC CGAGCACGAG GAGATCATCG CGGCGCTGCG CGAGCCGGGG CGTCCGCGCC TGGCCGACGT GCTGCGACGG CATTCGGAGA ACACTGCGAA GGAAGTACTG CGCGTGGTCG AGCAGACGCT GGCCGAGCCC GCGGCGCGCG CGGCGGGTGG CGCGCGGCGC TGA
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Protein sequence | MSVTQALPKT ARLRTLGMSA EIAARLRTMI QEGELPPGVR IDEKAFCEAF DVSKTPLREA LKVLVAEGLV LHRQYIGYRV APLDLDELRA TFETLHGLEA HAGELAAQRL SDAAVTKIER RHQAMIDAHD AGRRTDYFRI NQEIHQLIID GAGNAVLAGI YAMLMSKVHR ARGAANADML RWQESHTEHE EIIAALREPG RPRLADVLRR HSENTAKEVL RVVEQTLAEP AARAAGGARR
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