Gene Rmet_3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3887 
Symbol 
ID4040740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp431432 
End bp432160 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID637979306 
Producthypothetical protein 
Protein accessionYP_586024 
Protein GI94312815 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGAC AGATTCGCCT CGGCATGCTC ACGCCGTCCT CCAACACCGC GCTCGAACCC 
ATCACCAGCG CGATGGTCAG CGGCCTGCCC AATGTCAGCG CGCATTTCTC GCGCTTCACC
GTGACCGAGA TTTCGCTGCG CGATCAGGCG CTCGGCCAGT TCGATCTGGA GAAGATCCTT
GCTGCCGCTC GCCTGCTGGC CGATGCCCGT GTGGACGTCA TCGCGTGGAA CGGCACGTCG
TCGGGCTGGC TCGGCTTTGA CAAGGATGAA GCGCTGTGCC GCCAGATCAC CGAGGCCACG
GGCATCCCCG CCACCACATC CGTACTGGCC CTGAACGAAA TCCTGGAAAA GACCGGCGCA
CGCCGCTTCG GCCTGGCCAC GCCGTACCTG CACGATGTGC AGGAGCGCAT CGTCGCCAAC
TACCAGCGCA GCGGTTTCGA CTGCTCCGCG GAGCGCCACC TGGGATTGCA TGTGAACTAC
AGCTTCGCCG AAGTGGACGA GGACACCGTC CGCAAGATGG TGCGCGAGCT GGCCGCCGAA
AGGCCTCAGG CCATCACCAC GTTCTGCACC AACCTGCATG CCGCGCATCT GGTGGAAGCG
CTCGAGGCCG AGAACGGCAT CCCGGTCTAC GACACGATCG CCACCGTGGT GTGGAAGTCG
CTGCGTCTGG CCGGTGTCGA TACCCGCGCG CTGCAGGGTT GGGGCCGCCT GTTCCGCGAA
GTCGAATGA
 
Protein sequence
MTRQIRLGML TPSSNTALEP ITSAMVSGLP NVSAHFSRFT VTEISLRDQA LGQFDLEKIL 
AAARLLADAR VDVIAWNGTS SGWLGFDKDE ALCRQITEAT GIPATTSVLA LNEILEKTGA
RRFGLATPYL HDVQERIVAN YQRSGFDCSA ERHLGLHVNY SFAEVDEDTV RKMVRELAAE
RPQAITTFCT NLHAAHLVEA LEAENGIPVY DTIATVVWKS LRLAGVDTRA LQGWGRLFRE
VE