Gene Rmet_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3873 
Symbol 
ID4040567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp416687 
End bp417205 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID637979292 
Productputative transcriptional regulator 
Protein accessionYP_586010 
Protein GI94312801 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0174769 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.875929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCA CAACCCGTTC CGCCTCCGTC GACACCGGGA CCACCGACCC GTGGTCGAAC 
CTCGACGAAG CCGGCACCGA TCTCAACGTC AACGACTTCC TGACGACGAT GCTGAGCCAG
CTCGTCACGG CGCTGCGCAG CAACGTGACG GAGCCGTACG CGTCCCGCTT CGAGCTAACC
GTGCCGGAGT GGCGCATTCT GGCGCTGCTG GCGCACGGCG AGACGATGTC ATTCGCGGAA
CTGGTCAGGC AGTCCACCTC TGACAAGGCG CTGGTCAGCC GGACGCTGCG GCTGCTGGAG
GATCGTGGGC TGGTGACGCT GGAATCGGAA GGCGGAACGC GCCGGCGCCT GACATGCCGG
ATTACGCCCG AAGGAGCCGC GCTCCATGCG CAGGTCATTC CGTTGGCGCG TCGCGGGCAG
GCATCGGTCA TCCGGATGCT GAGTCCAGAG GAAAGGCGCG GGCTTTACTC AGGGTTGCGC
AAGCTGCATG GGCTCTGCAC CACCCCGAAC AAGCCGTAG
 
Protein sequence
MSSTTRSASV DTGTTDPWSN LDEAGTDLNV NDFLTTMLSQ LVTALRSNVT EPYASRFELT 
VPEWRILALL AHGETMSFAE LVRQSTSDKA LVSRTLRLLE DRGLVTLESE GGTRRRLTCR
ITPEGAALHA QVIPLARRGQ ASVIRMLSPE ERRGLYSGLR KLHGLCTTPN KP