Gene Rmet_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3858 
Symbol 
ID4040552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp400022 
End bp401377 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content66% 
IMG OID637979277 
Productputative acyl-CoA dehydrogenase 
Protein accessionYP_585995 
Protein GI94312786 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.99682 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGAATT CGCGCTTAGT GACGCGGGCG GGATTGGTTA CTCTGAACGG CCCAGAGCAA 
CCCTCGCCGA TAGGCGCAGA AGCCCGTACC GTGACTACAG AAGCTGCACT TCAAATCGTC
GCCCCTGCAG GTGCGACAAA ATCGAACCAC CCGCATCCCG CGCCGCCCGG CAACGCACTA
CCGCCGGCAG CGGATGTCGC CATCCTGCGT CAGCGCGCGC AAGCGCTACT GCCCCGGATT
GCCGAAGGCG CGGCAATCCG CGAGCTCCAG CGCGATCTGC CCTACGCTTT CGCGCGAGAG
GTCGCCAACG CCGGCCTGCT GACGTTCCGC ATTCCCAAGG TCTACGGCGG GCCGGGTGGC
ACGTTGCGCG ATGCCATCCG CTTCGTGATC GAACTCGCGG CCGTGGACTC CAATCTCGCA
CAGGCGCTGC GTCCCAACTT CGGCCTGGTG GAAGGTCTGC TGGCCGCGCA CGACAACGAA
GCCGATCGCA AGCGCTGGTT CGGCCGTCTG CTGGCCGGGC ATATCATCGG CAACGGCGGC
GTGGAGCGCG GCGGCAAGCA GGGCGCCATT CAGGCCACCA TCGTGCGCCA TGGCGACCAC
TACCTCGTCA ATGGCACCAA GTACTACAGC ACCGGTGGGC TCTATGCGGA CTGGGTCAGC
TCGATCGCGC TGGACGAAGC CGGCAAGGAA ACGCACTTCA CCGTGCCGCG CGAACGCGCG
GGCATGGAAC TGGTGGACGA CTTCGATACG ATCGGTCAGC GGCTGACGGC CAGCGGTACC
ACGCGCTTCA CGAACATGCG CGTGGAGACG GACGAGGTAC GCGGCAGCTT TCTGCCGCGT
GATCGCCGCA ACCCGGTTTC GCCGGTATTC CAGCTATTCC TTGCCGCCAC CGAGGCGGGC
ATCGCACGCA ATGCGCTCAA TGATGCGGTC TGGTTCGCGC GCAACAAGGC CCGTCCGATC
AAGCACAGTT CGGCCGAGCG CTCGGTGGAT GACCCCTACG TGCAAGAGAC CATTGGCCAG
ATCTCTGCCG AGGTCTTTGC CGCCGAAGCC GCTACGCTAC GTGCGGCCGA TACCATCGAC
GCCGCCTGGG CCGACAACCT GAGCAACGCA TCGCTGACGC AGGCATCGAT CGACGTTGCC
CAGGCGCAGG TCTTCACCGT TGCAGCCGCG CTCAAGGCTT CGGAGTTGGC CCTTGATGTT
GGCGGGGCTT CCTCGTGCGA CCGCCAGTAC AACCTGGACC GTCACTGGCG CAACGCCAGG
ACCGTGGCGA ATCACAATCC CCGCCAATGG AAGGCAGCGG CGGTGGGCGC CTGGCTGCTC
AAGGATGAGC CGCCGCCCAC GACCGGCCTG TTCTGA
 
Protein sequence
MRNSRLVTRA GLVTLNGPEQ PSPIGAEART VTTEAALQIV APAGATKSNH PHPAPPGNAL 
PPAADVAILR QRAQALLPRI AEGAAIRELQ RDLPYAFARE VANAGLLTFR IPKVYGGPGG
TLRDAIRFVI ELAAVDSNLA QALRPNFGLV EGLLAAHDNE ADRKRWFGRL LAGHIIGNGG
VERGGKQGAI QATIVRHGDH YLVNGTKYYS TGGLYADWVS SIALDEAGKE THFTVPRERA
GMELVDDFDT IGQRLTASGT TRFTNMRVET DEVRGSFLPR DRRNPVSPVF QLFLAATEAG
IARNALNDAV WFARNKARPI KHSSAERSVD DPYVQETIGQ ISAEVFAAEA ATLRAADTID
AAWADNLSNA SLTQASIDVA QAQVFTVAAA LKASELALDV GGASSCDRQY NLDRHWRNAR
TVANHNPRQW KAAAVGAWLL KDEPPPTTGL F