Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3858 |
Symbol | |
ID | 4040552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 400022 |
End bp | 401377 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637979277 |
Product | putative acyl-CoA dehydrogenase |
Protein accession | YP_585995 |
Protein GI | 94312786 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.99682 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGAATT CGCGCTTAGT GACGCGGGCG GGATTGGTTA CTCTGAACGG CCCAGAGCAA CCCTCGCCGA TAGGCGCAGA AGCCCGTACC GTGACTACAG AAGCTGCACT TCAAATCGTC GCCCCTGCAG GTGCGACAAA ATCGAACCAC CCGCATCCCG CGCCGCCCGG CAACGCACTA CCGCCGGCAG CGGATGTCGC CATCCTGCGT CAGCGCGCGC AAGCGCTACT GCCCCGGATT GCCGAAGGCG CGGCAATCCG CGAGCTCCAG CGCGATCTGC CCTACGCTTT CGCGCGAGAG GTCGCCAACG CCGGCCTGCT GACGTTCCGC ATTCCCAAGG TCTACGGCGG GCCGGGTGGC ACGTTGCGCG ATGCCATCCG CTTCGTGATC GAACTCGCGG CCGTGGACTC CAATCTCGCA CAGGCGCTGC GTCCCAACTT CGGCCTGGTG GAAGGTCTGC TGGCCGCGCA CGACAACGAA GCCGATCGCA AGCGCTGGTT CGGCCGTCTG CTGGCCGGGC ATATCATCGG CAACGGCGGC GTGGAGCGCG GCGGCAAGCA GGGCGCCATT CAGGCCACCA TCGTGCGCCA TGGCGACCAC TACCTCGTCA ATGGCACCAA GTACTACAGC ACCGGTGGGC TCTATGCGGA CTGGGTCAGC TCGATCGCGC TGGACGAAGC CGGCAAGGAA ACGCACTTCA CCGTGCCGCG CGAACGCGCG GGCATGGAAC TGGTGGACGA CTTCGATACG ATCGGTCAGC GGCTGACGGC CAGCGGTACC ACGCGCTTCA CGAACATGCG CGTGGAGACG GACGAGGTAC GCGGCAGCTT TCTGCCGCGT GATCGCCGCA ACCCGGTTTC GCCGGTATTC CAGCTATTCC TTGCCGCCAC CGAGGCGGGC ATCGCACGCA ATGCGCTCAA TGATGCGGTC TGGTTCGCGC GCAACAAGGC CCGTCCGATC AAGCACAGTT CGGCCGAGCG CTCGGTGGAT GACCCCTACG TGCAAGAGAC CATTGGCCAG ATCTCTGCCG AGGTCTTTGC CGCCGAAGCC GCTACGCTAC GTGCGGCCGA TACCATCGAC GCCGCCTGGG CCGACAACCT GAGCAACGCA TCGCTGACGC AGGCATCGAT CGACGTTGCC CAGGCGCAGG TCTTCACCGT TGCAGCCGCG CTCAAGGCTT CGGAGTTGGC CCTTGATGTT GGCGGGGCTT CCTCGTGCGA CCGCCAGTAC AACCTGGACC GTCACTGGCG CAACGCCAGG ACCGTGGCGA ATCACAATCC CCGCCAATGG AAGGCAGCGG CGGTGGGCGC CTGGCTGCTC AAGGATGAGC CGCCGCCCAC GACCGGCCTG TTCTGA
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Protein sequence | MRNSRLVTRA GLVTLNGPEQ PSPIGAEART VTTEAALQIV APAGATKSNH PHPAPPGNAL PPAADVAILR QRAQALLPRI AEGAAIRELQ RDLPYAFARE VANAGLLTFR IPKVYGGPGG TLRDAIRFVI ELAAVDSNLA QALRPNFGLV EGLLAAHDNE ADRKRWFGRL LAGHIIGNGG VERGGKQGAI QATIVRHGDH YLVNGTKYYS TGGLYADWVS SIALDEAGKE THFTVPRERA GMELVDDFDT IGQRLTASGT TRFTNMRVET DEVRGSFLPR DRRNPVSPVF QLFLAATEAG IARNALNDAV WFARNKARPI KHSSAERSVD DPYVQETIGQ ISAEVFAAEA ATLRAADTID AAWADNLSNA SLTQASIDVA QAQVFTVAAA LKASELALDV GGASSCDRQY NLDRHWRNAR TVANHNPRQW KAAAVGAWLL KDEPPPTTGL F
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