Gene Rmet_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3853 
Symbol 
ID4040547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp395463 
End bp396008 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content60% 
IMG OID637979272 
Productputative transcriptional regulator 
Protein accessionYP_585990 
Protein GI94312781 
COG category[K] Transcription 
COG ID[COG1510] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.504751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.711685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA TGCAACGCAT GGAACTGAAA CCGATCGCCG AACGCTTCGT GCTGCACTGG 
GGGGAAATGG GCTCGCGCTG GGGTGTCAAT CGCACCGTGG CGCAGGTTCA CGCCCTGCTC
TATCTGGCCG CGCGCCCCAT GGACGCCGAG GAAATCACGG ATACGCTGGG CGTGGCCCGC
TCCAACGTGA GCAACAGTCT CAAGGAACTG CAGTCCTGGC ACCTCGTCAA GGTGGTGCAT
ATCAAGGGCG AGCGTCGTGA CTTCTTCGAG ACGTCGACCG ACATCTGGGA ACTGTTCAAG
CTCATCGTGG CCGGCCGCCG GCAGCGTGAG ATCGATCCGA CGGCCGTTGC GCTGCGGGAA
TGCCTCGACA ACCCGGCAAT CGGCGAAGAA GACACCGGAA CGCGCGAACG TATCGAGGAA
ACCCTGAAGT TCATCGAAAC CATGAGCACG CTGGCCGATG AAATGCTGCG GCTGAAACCG
GAGACGCTGA TGAAGACACT GGGCTTGACG GCGAAGATCA GCAACGCGGT ACGCAAACGT
AGCTAA
 
Protein sequence
MNRMQRMELK PIAERFVLHW GEMGSRWGVN RTVAQVHALL YLAARPMDAE EITDTLGVAR 
SNVSNSLKEL QSWHLVKVVH IKGERRDFFE TSTDIWELFK LIVAGRRQRE IDPTAVALRE
CLDNPAIGEE DTGTRERIEE TLKFIETMST LADEMLRLKP ETLMKTLGLT AKISNAVRKR
S