Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmet_3853 |
Symbol | |
ID | 4040547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cupriavidus metallidurans CH34 |
Kingdom | Bacteria |
Replicon accession | NC_007974 |
Strand | - |
Start bp | 395463 |
End bp | 396008 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637979272 |
Product | putative transcriptional regulator |
Protein accession | YP_585990 |
Protein GI | 94312781 |
COG category | [K] Transcription |
COG ID | [COG1510] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.504751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.711685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGAA TGCAACGCAT GGAACTGAAA CCGATCGCCG AACGCTTCGT GCTGCACTGG GGGGAAATGG GCTCGCGCTG GGGTGTCAAT CGCACCGTGG CGCAGGTTCA CGCCCTGCTC TATCTGGCCG CGCGCCCCAT GGACGCCGAG GAAATCACGG ATACGCTGGG CGTGGCCCGC TCCAACGTGA GCAACAGTCT CAAGGAACTG CAGTCCTGGC ACCTCGTCAA GGTGGTGCAT ATCAAGGGCG AGCGTCGTGA CTTCTTCGAG ACGTCGACCG ACATCTGGGA ACTGTTCAAG CTCATCGTGG CCGGCCGCCG GCAGCGTGAG ATCGATCCGA CGGCCGTTGC GCTGCGGGAA TGCCTCGACA ACCCGGCAAT CGGCGAAGAA GACACCGGAA CGCGCGAACG TATCGAGGAA ACCCTGAAGT TCATCGAAAC CATGAGCACG CTGGCCGATG AAATGCTGCG GCTGAAACCG GAGACGCTGA TGAAGACACT GGGCTTGACG GCGAAGATCA GCAACGCGGT ACGCAAACGT AGCTAA
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Protein sequence | MNRMQRMELK PIAERFVLHW GEMGSRWGVN RTVAQVHALL YLAARPMDAE EITDTLGVAR SNVSNSLKEL QSWHLVKVVH IKGERRDFFE TSTDIWELFK LIVAGRRQRE IDPTAVALRE CLDNPAIGEE DTGTRERIEE TLKFIETMST LADEMLRLKP ETLMKTLGLT AKISNAVRKR S
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