| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3848 |
|---|
| Symbol | |
|---|
| ID | 4040542 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | + |
|---|
| Start bp | 390737 |
|---|
| End bp | 391222 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637979267 |
|---|
| Product | putative 3-demethylubiquinone-9 3-methyltransferase |
|---|
| Protein accession | YP_585985 |
|---|
| Protein GI | 94312776 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3865] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.52304 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA AGAACACGAT CTGTCTGTGG TACGACGGCG ATGCGCTCGA CGCCGCGACT
TTCTATGCCA AGACCTTCCC CGACAGCGCC GTCGGCGCCG TCTTCCGCGC ACCTGGCGAC
TATCCCGATG GCAAGCAGGG CGATGTCCTG ACGGTGGAGT TCACCGTGGC GGGCATTCCC
TGTGTTGGTC TCAATGGCGG CCCGCATTTC AAGCACAGCG AGGCGTTCTC GTTTCAGATC
GCCACTGACG ATCAGGCTGA GACCGACCGA CTTTGGAATG CAATCGTCAG CCACGGCGGC
CAGGAAAGCG CGTGTGGCTG GTGCAAGGAC CGGTGGGGAT TGTGCTGGCA GATCACGCCG
CGCGCGCTCC TGGCTGCAAT CACGGACCCC GATCGCGCGG CGGCCAAACG GGCGTTCGAT
GCCATGATGA CCATGGGCAA GATCGACATC GCCGCGATCG AGGCGGCACG GGCGGGCCGA
AGCTAA
|
|---|
| Protein sequence | MASKNTICLW YDGDALDAAT FYAKTFPDSA VGAVFRAPGD YPDGKQGDVL TVEFTVAGIP
CVGLNGGPHF KHSEAFSFQI ATDDQAETDR LWNAIVSHGG QESACGWCKD RWGLCWQITP
RALLAAITDP DRAAAKRAFD AMMTMGKIDI AAIEAARAGR S
|
|---|
| |