| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3844 |
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| Symbol | rpoT |
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| ID | 4040538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 388149 |
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| End bp | 389009 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979263 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_585981 |
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| Protein GI | 94312772 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.577317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGCGG ACGCCGGTCT TTCGGAAGCC GCGGCGAGCT TCGAGCCATT GCGGCCCAAG
CTGATCCGCG TCGCGTACCG GATGCTCGGT TCGGTCGCGG ATGCGGAGGA CGTGGTGCAG
GAAGCGTTCA TCCGTTGGAT GAACGCCGAG CGCGCCGAGG TGCGTGTGCC CGAGGCGTTC
CTGCGGCGCA TGGTGATGCG GATGTGCCTC GACGAGCTGA AATCGGCGCG TCACCAGCGC
GAAACCTACA TCGGTCCCTG GCTTCCCGAC CCGGTCATCG AGGAAGAGGA GCAGGACGAC
GTCACGCTGC CGCTGATGCT GGCGCTCGAA CGCCTGTCGC CTCTCGAGCG CGCGGCGTTC
CTGCTGCACG ACGTGTTCGG CCTCGCGTTC GATGAGGTGG CGGCGACGAT CCAGCGCGAG
CCGGCCGCGT GCCGGCAGCT TGCGGCGCGG GCGCGTGCCA ATGTGAGGGA ATCGCGCCCG
CGTTTTCAGG TCGAGAAGGA GCGGGGCCTG GCACTCGCAA AGGCATTCTT CGACGCCTCA
CGCAGCGGAG ACATGGGCAC GCTCAGCACG ATGCTGGCGG CCGATGTGAG CCTGCATGCG
GACGGCGGCG GCCAGCGCCC GGCGATTGGC CATCCGGTGT TCGGCTTCGA CGAGGTAATG
CGTGTGCATG AACAACTGTC GAAATACTTC CAGAAGAATG GCTCGACCTT TGTCCGCGCG
GCTTTCATCA ACGGGTTGCC GGGCATCGTC ACGCGCGAAT CCGACGGCGA ACTGCAGACG
ACGGCGCTAG AGATCGAGGG CGGCAAGATC GCGGCAATTT ATGTGGTGCG CAACCCGGAC
AAGCTGCGGC ATCTGCATTA A
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| Protein sequence | MVADAGLSEA AASFEPLRPK LIRVAYRMLG SVADAEDVVQ EAFIRWMNAE RAEVRVPEAF
LRRMVMRMCL DELKSARHQR ETYIGPWLPD PVIEEEEQDD VTLPLMLALE RLSPLERAAF
LLHDVFGLAF DEVAATIQRE PAACRQLAAR ARANVRESRP RFQVEKERGL ALAKAFFDAS
RSGDMGTLST MLAADVSLHA DGGGQRPAIG HPVFGFDEVM RVHEQLSKYF QKNGSTFVRA
AFINGLPGIV TRESDGELQT TALEIEGGKI AAIYVVRNPD KLRHLH
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