Gene Rmet_3843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3843 
Symbol 
ID4040537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp387646 
End bp388149 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content63% 
IMG OID637979262 
Productputative peroxidase 
Protein accessionYP_585980 
Protein GI94312771 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.568835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCGT CACCCACACA AGGAGATGAA ACCATGACTG CAAGACTTGA CCCGTTCGCC 
GCCGCTCCCG TTCAGATGAA GTCCTGGATG GGCACATCCA TTGCCATAGC CGGGAGTCTC
GAGCCGAGCC TGGTGTCGCT GGTTGAAGTC CGCGCGTCGC AGATCAACGG ATGCGCAAAC
TGCATTAACA TGCACACGAC CCAGGCACGC GAACGCGGGG AGACGGAACA GCGCCTCTAT
CTGCTGTCCG CCTGGCGAGA AGCGCCTTGC TACACCGATC GCGAGCGCGC GGCACTGGGC
TGGACCGAAG CCATGACCCG GTTGTCCGAA GGGCACGCGC TCGACCGTGC CAGCGCGACG
CTCAGGGAAC ACTTTACCGA GGAGGAGCAG GTGAAGCTTA CGCTCATGAT CAACGTGATC
AACGGCTGGA ACCGGCTCGC GGTCGGATTC GGTCTCTGGG TCGATCCGGC GGCTGCCAAG
GCCGCGGCCA AGGCAGCCGC GTGA
 
Protein sequence
MSSSPTQGDE TMTARLDPFA AAPVQMKSWM GTSIAIAGSL EPSLVSLVEV RASQINGCAN 
CINMHTTQAR ERGETEQRLY LLSAWREAPC YTDRERAALG WTEAMTRLSE GHALDRASAT
LREHFTEEEQ VKLTLMINVI NGWNRLAVGF GLWVDPAAAK AAAKAAA