| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3836 |
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| Symbol | hmvC |
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| ID | 4040531 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 377957 |
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| End bp | 379294 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637979257 |
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| Product | heavy metal cation tricomponent efflux outer membrane porin HmvC |
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| Protein accession | YP_585975 |
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| Protein GI | 94312766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCG TGGGCTCCAT TGCCGCCTCG GCCGGGCAAG CCGCCAGCGG ACCCATGCCT
CCAGATGGCC CCTGCATGCC GCCTCCGGCA AAGGCCGCGC TGACCCTGGC GCAGGCACGC
CTTGACGCGC TGCGCTGCAA CCGCGACATC ATCTCGGCCC GTCGCGGCGA GGAAGCCAGC
CAGGCCGACA TCCAGATTGC CTCCCAACGC CCGAACCCGG TCCTGAGCCT GGGTGTGGCC
AATATCAACC CGCATCTTGG CGTGGGCGCC GGGAACTGGC GCAGCAAGAC CGTGGACTCG
ACGGTACGCG TCGACCAGGT GATCGAGACC GCGAACAAGG GCAACCTTCG CACCGACGCG
GCCCGCAAGG CCAGCGCCGC CGCCGGCGAG CAGACGCAGG CCGTGGTGGC CCAGCAGGTC
GGCGCCGTGG AGCAGGCGTG GTATGACGCG GTAGCCAGCC AGAGCCGGGT AGAGGTGCTG
ACAGAAACCG TCGGTCTCTA TGGCAAGACT CAGCAAGCGA ACGAGGCCCG GCTCAAGGCT
GGCGACGTGG CACGCGCCGA TGTGACCAAG CTCCAGCTCG AAACGCTGCG GGCCCAGAGT
GACCTGCGCT CCGCCCAGTC GGACTATGCC ACCAGCAAGG CAGCACTGGC CGCCACGATC
GGTCTTCCGG GCACGCTGTT GGACAACCGG CTCGTGCCGG ACTGGCCTGC GCTCGATGCC
CCGGTGCCGT CAGTCGATCC CGAAGTGCTG CAGCGCCGCC CGGATGTGAC GGCTGCCGAA
GCCCGGCTGG CCGCCGCGGC CTCCGCGCGT GACCTGGCGC GTGCCGGCCG TGTGCCCGAC
GTGACCGTCG GCGCCCAGTA CGAGCACTAT CCGGTTTCCG AGGCCAATAC CACCGGCAGC
GGCAACAGCT ACGGCGTGTT CATCTCGATT CCGCTGTTCG TGCGCCACAG CTTCGGCGGT
GAAGCGCGCC GCGCCGAGGT GGACTACTAC GCGGCGCTCG ACGACCGTAA TCGTATCCTG
CTGGCCGCGC AGAACGACAT CGAACGGCTG CGCAGCCAGC TCGAATCGGC GCGCGCGTCG
CTGCAGCAGA TGCAGACCGC CGTGCTGCCG GCGGCGGAGA CCGTCGCGCA GAGCGCCGAA
TTCGCCTATA CGAAGGGTGC CACCGGCGTG CTCGACCTGC TCGACGCGCG CCGCGCGCTG
CGTCAGACGC GCCTGGACGC CGTCGACGTG CAGGGCAACT TCGCCAAGGC CATGGCCGCC
TACCGCGCCG CCCTGCAGGC CACCACTTCC GATATCAACA AGCTTCCCCA GGTTCGAACC
GATGCATCGC ATCCCTGA
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| Protein sequence | MASVGSIAAS AGQAASGPMP PDGPCMPPPA KAALTLAQAR LDALRCNRDI ISARRGEEAS
QADIQIASQR PNPVLSLGVA NINPHLGVGA GNWRSKTVDS TVRVDQVIET ANKGNLRTDA
ARKASAAAGE QTQAVVAQQV GAVEQAWYDA VASQSRVEVL TETVGLYGKT QQANEARLKA
GDVARADVTK LQLETLRAQS DLRSAQSDYA TSKAALAATI GLPGTLLDNR LVPDWPALDA
PVPSVDPEVL QRRPDVTAAE ARLAAAASAR DLARAGRVPD VTVGAQYEHY PVSEANTTGS
GNSYGVFISI PLFVRHSFGG EARRAEVDYY AALDDRNRIL LAAQNDIERL RSQLESARAS
LQQMQTAVLP AAETVAQSAE FAYTKGATGV LDLLDARRAL RQTRLDAVDV QGNFAKAMAA
YRAALQATTS DINKLPQVRT DASHP
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