Gene Rmet_3825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3825 
Symbol 
ID4040520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp366739 
End bp367476 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID637979246 
Producthypothetical protein 
Protein accessionYP_585964 
Protein GI94312755 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0366225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGCA CCCAGCATGA CAGTTTTTTG ACGGTCAGCA AGCTGTCACG CGACCCGGTT 
TCCGTGGCCG CCGGTCGGCC TGCGCTACAC TCGCCTCCTG CCCAGCGACC ACTGCATTTC
CCCGTCTTGC CTACCTACAC GCTTGCCGCC CCAGTTCACG CCGACATCGA GATCCGCAAG
AGCCGCTTTA TCGCACTGGC CGTGCCGGTG GCCGACCGTG ATGCGGCGAT GGCCGTGATT
CAGGATCTGC GGGCGCAGCA TCCCACCGCC ACCCACGTGT GCTGGGCGCT GCTGGCGGGC
GGACAATCTG GCATGTCAGA CGATGGCGAG CCTTCTGGCA CGGCAGGCCG GCCGATCCTC
GAAGTTCTTC GCCATCACGA CCTCGATGGC GTGCTGGCGG CCGTCGTGCG GTACTACGGC
GGCGTCAAGC TGGGCGCGGG CGGCCTCGTG CGGGCCTATA CCGACGCCAT CGCCGGCGCG
CTCAAGGACG CCGAGCGTAT CGAACGCATT GCGTACACCA CGTTTGCCAT CGAGGTCGAC
TATGCCGACG AATCGCGCGT GCGACGCTGG CTGGAGTTGT CGGCCGCCGA AGGCTGCACG
CTGGTCGACA CCCGATATGA CGCGTTGGCG ACGCTGCTGA TCCGCCTGCC CGCCACGCTG
CGCGATGGCG CGATTGCCAC GCTGCGCGAC GCCACGCACG GCCGAGCCCG ATTCCCGGAT
ACCGAAGAGC AGGCATGA
 
Protein sequence
MISTQHDSFL TVSKLSRDPV SVAAGRPALH SPPAQRPLHF PVLPTYTLAA PVHADIEIRK 
SRFIALAVPV ADRDAAMAVI QDLRAQHPTA THVCWALLAG GQSGMSDDGE PSGTAGRPIL
EVLRHHDLDG VLAAVVRYYG GVKLGAGGLV RAYTDAIAGA LKDAERIERI AYTTFAIEVD
YADESRVRRW LELSAAEGCT LVDTRYDALA TLLIRLPATL RDGAIATLRD ATHGRARFPD
TEEQA