| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3808 |
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| Symbol | |
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| ID | 4040643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 348568 |
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| End bp | 349860 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979229 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_585947 |
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| Protein GI | 94312738 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CCTCCGATTC GACCACCGGC CTGCCGCTGC CGTCCCGGCA GACCGGCGCC
TTGAGCCATA TCCGCGTGCT GGATCTATCG CGTGTGCTGG CTGGGCCGTG GTGCACGCAG
AACCTCGCCG ACATGGGCGC GGACGTGATC AAGGTCGAGA AGCCCGGCGC GGGGGATGAC
ACCCGGCACT GGGGGCCTCC GTATCTGCAA GACGAAGATG GGCCCACGAG CCAGGCGAGC
TACTTTGCCG CGTGCAATCG CAACAAGCGC TCGGTGACGA TCGACATCGC CAAGCCGGAA
GGGCAGAAGC TGATCCGTGA ACTGGCGATG CAGAGCGACG TGGTCATCGA GAACTACAAG
ACCGGTGGCC TCAAGCGCTA CGGGCTCGAC TACGACTCGC TCAGCGCGCT GAATCCGCGC
CTGATCTACT GCTCGGTCAC GGGTTTCGGT CAGACCGGTC CTTACGCGGC ACGTCCCGGC
TATGACCTGC TGATCCAGGC CATGAGCGGC CTGATGAGCA TCACTGGCCA GGCCGACGGA
GAGCCTGGCG CGGGCCCGGT ACGCGTGGGC GTCGCCGTGA TCGACGTGTT CACGGGCATG
TACGCGACCA CGGCCATTCT TGGCGCGCTG GAGGCACGGC ACTTCACCGG CCGAGGCCAG
CATATCGATG TCGCGCTGCT CGACGTTGCC ATGGCGGTCC TGGCGAATCA GGGCGCGGGA
TACCTGAACG CGGGTGTCGT GCCGACCCGC CAGGGCAACA CGCACCCGAG CGTCGTGCCG
TATCAGGATT TCCCGACGCA GGACGGCGAC ATGTTGCTTG CCATCGGCAA CGACGGCCAG
TTCGTGCGCT TCTGCGAAGC CGCCGATGTC GACTGGGCGC GCGACGAGCG GTTCGCTACC
AACAGCGCCC GGGTCACACA TCGCCGGACG CTGATTCCGA TGATGAGCGA GGTCACGCGG
ACCCGGCCGA CCAGCGAATG GATTCGTCTG CTGGAGGCTG CGTCAGTGCC TTGCGGTCCG
ATCAACGATA TCGCCCAGGC ATTTGCCGAC GAGCATGTCC AGCATCGCGG ACTGCGCGTT
GAGCAGGAGC GTTACGGGGA GGCAGGATGT CCCCCGTCGG ATAGCGTGAA CCGGATCTGC
AGCACGGCCA GTCCGCTGAG GCTGTCGGAG ACGCCCACGA CGGTGCGTTA CGCGCCACCG
GGGCTCGGCC AACATACGGA CGAGGTGCTG CGCGACAATC TCAAGCTTGG TTCCGACGAA
GTCGCGGACT TGCGCGCCAA GGGCATTCTG TAA
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| Protein sequence | MTTPSDSTTG LPLPSRQTGA LSHIRVLDLS RVLAGPWCTQ NLADMGADVI KVEKPGAGDD
TRHWGPPYLQ DEDGPTSQAS YFAACNRNKR SVTIDIAKPE GQKLIRELAM QSDVVIENYK
TGGLKRYGLD YDSLSALNPR LIYCSVTGFG QTGPYAARPG YDLLIQAMSG LMSITGQADG
EPGAGPVRVG VAVIDVFTGM YATTAILGAL EARHFTGRGQ HIDVALLDVA MAVLANQGAG
YLNAGVVPTR QGNTHPSVVP YQDFPTQDGD MLLAIGNDGQ FVRFCEAADV DWARDERFAT
NSARVTHRRT LIPMMSEVTR TRPTSEWIRL LEAASVPCGP INDIAQAFAD EHVQHRGLRV
EQERYGEAGC PPSDSVNRIC STASPLRLSE TPTTVRYAPP GLGQHTDEVL RDNLKLGSDE
VADLRAKGIL
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