Gene Rmet_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3797 
SymbolbugT 
ID4040632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp336315 
End bp337277 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content63% 
IMG OID637979218 
Productextra-cytoplasmic solute receptor 
Protein accessionYP_585936 
Protein GI94312727 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACGAA TTTTTCTTGC CGCGGTAATG CTTGTGCTTG CGAACGGCTC GGCACTTGCC 
GATGCCTACC CATCCCGTCC CGTCAGATTG CTGGTTGGGT ATGCGCCGGG TGGGCCGGTC
GATACCGCCG CGCGCATCTA TGCGGACTAC CTCGGGCGTG TGCTCAAGCA GCCGGTAATC
GTCGATAACC GGGCGGGTGC CAGCGGCGCC ATCGCGGCCG GCATGACGGT CAGCGCCAAG
CCTGACGGCT ACACGCTCTA TTTCGTGGCC AGCCCGACGA TGACGATGAC GCCGCTGATC
CAGAGGTCCG TCAGCTTCAA GCCGGCACAG GATTTCAGCT ATGTCGGCCT GATCACCGAC
TACACCAACG TGCTGCTGAT CAACAAGGAT TTCCCGGCCA GGAACGTGGA CGAACTGGTC
TCGTACGCGC GCAAGCATCC CGGTGAAGTG AGCTTCGGTT CGGCGGGCGT GGGTGCGTCG
AACCATCTGT CGGCGGAACT GCTTGCGCAG ATGACAGGAG TGAAGATGCT GCACGTGCCA
TACAAGGGCA ATGCGCCGGC TATGGCCGAC GTCATCAGCG GCAAGGTGAC CTTCATGTTC
GATATCACCG GAACGGCTAT CGGCCATATC CGGGGCGGCA AGGTACGTGC GCTGGCCGTG
ACGTCGAAGA CGCGCAACCC CGCGCTGCCC AATGTGCCGA CACTGGTCGA ATCCGGCCTC
AAGCAGTACG ACCTGACGGG CTGGTACGCG CTGGTTGGTC CTCCGGGGCT ACCTGCCGAT
GTGACGGATC GACTCGTGAA GGCGCAGCAG GCCGTGGTGC AGGATGCGGC CTACCGGGAG
CGGATGGTCG ATGGCGGCTA TGACCTGAAC GTCTCCGGCC CGGCCGCGCT GCAAGAGCGT
ATCAAGAAGG AACTCGCGCT CTGGGGCAAC GTGGTCAAGA CTGCGAATAT CGAGGTCGAG
TAA
 
Protein sequence
MLRIFLAAVM LVLANGSALA DAYPSRPVRL LVGYAPGGPV DTAARIYADY LGRVLKQPVI 
VDNRAGASGA IAAGMTVSAK PDGYTLYFVA SPTMTMTPLI QRSVSFKPAQ DFSYVGLITD
YTNVLLINKD FPARNVDELV SYARKHPGEV SFGSAGVGAS NHLSAELLAQ MTGVKMLHVP
YKGNAPAMAD VISGKVTFMF DITGTAIGHI RGGKVRALAV TSKTRNPALP NVPTLVESGL
KQYDLTGWYA LVGPPGLPAD VTDRLVKAQQ AVVQDAAYRE RMVDGGYDLN VSGPAALQER
IKKELALWGN VVKTANIEVE