| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3788 |
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| Symbol | fadD |
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| ID | 4040623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 325107 |
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| End bp | 326678 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979209 |
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| Product | acyl-CoA synthetase |
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| Protein accession | YP_585927 |
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| Protein GI | 94312718 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCCCC AGGCATCCGC CCGATACGGC TGCGCCACAA TCGCGCAGCT CTACACCTCT
GCTTTTCGTG CTTGTCCCCA GGCTCTGGCG CTGGTCGAGG ACGGTGTGAC ACTCACCTAT
GAGGCGTTGG CCCGGCGCTC GTACCGCATG GCCAGGTTGT TCCATGCACG CGGCCTTCAA
CGTCAGGATG TCGTGGCCTT TCTGGTGGGC AATCGAGTCG AGGCAGTCGT GGCGATCATC
GCGGCGCAGC TTGCAGGACT CAAGGCGGTT TCATTGCATC CGATGGCGTC GGAAGAGGAC
CACGCATTCG TGCTCGCCGA CGCCGGTGTG AAAGCGCTGG TAGTCGACGA TGCGCGTTTC
GCAGCGCGCG CGCAGGTCCT GCTGGCGCGT GTCGCAAACG TGCTGATGAT GCCGCTGGAC
GACGGCGTGC TAGGTGCGGG TCTCGCCAGT CAGGCGGCGG CCATGGACGA CGCGGAACTG
GAACCGGGCG ACGACGCCGC TGAAATCAGC AAGATCTCAT ACACCGGCGG TACCACGGGT
CGCTCCAAGG GCATCCTCCA CACGCACCGC ACGGTGGTGA CGATGCTGCA GGCCATGCTG
GCGACGTATG AATGGCCGCA GCAGATCCGC TATCTGGTGA CCACGCCGAT TTCACATGCT
TCGGGCAGCC TGATCCTGCC GACGCTTTTG CGCGGCGGTA CCGTGTACTT GTGCGACAAG
TTCAGCCCTT CTGACTTTGT GTCGCGGGTA GCCGAGCAGC GCATCAATCT GACCTTCCTG
GTGCCAACGC AGATCTACGC ATTGCTGGAT CACGCTGGCC TTGCGGAGGC GGACTTGTCC
AGTCTGGAGC TGGTGCTGTA TGGCGCCTCG CCGATTGCGC CGTCTCGCCT GCAGGAAGCA
CTGAACAGGA TTGGCCCGGT ATTCGGCCAG GTCTACGGTC AGGCCGAGGC GCCGATGACC
ATCAGCTATC TGTCCAGACG CGACCATGAC TTGTCTCGCT CGCACCTGCT GAGCTCGTGC
GGCAAGGTCA TGGTCGGCAA TCAGGTCAAG TTGTTAGACA GTGCGAGGCG CGAAGTGCCA
GTCGGCGAAG TCGGCGAGTT GTGCGTGCGC GGTCCGCTGG TGATGGACGG GTATCTCAAC
CGGCCCGAAG AGAACGAGAA AGTATTCGCT GGCGACTGGC TGCATACCGG CGACATGGCG
CGCCGCGATG CGGCGGGCTA TCTCTACATC GTCGATCGCG CCAAGGACAT GATCATCACG
GGCGGGTTCA ACGTTTATCC GAGCGAAGTT GAACATTGCC TGGCACAACA CCCGGCCATC
GCCATGTCCG CGGTGTTCGG TGTGCCCGAC GAGAAGTGGG GCGAATCCGT CACGGCCATT
GTGGTGCCGA AGCCAGGACA GACACCAGAT GCGAACGAGC TTATCGAGTT CGTCAAGAGC
AGGAAAGGCG TGGTCAATGC GCCCAAGACG GTGATCTTCG CGGAGCAGTT GCCGATGACG
GCGCTTGGCA AGATCGACCG AAAGGCCATC CGAGGCAGCT ACTGGAACGG CAAAGACCGA
CAAGTAGCCT GA
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| Protein sequence | MAPQASARYG CATIAQLYTS AFRACPQALA LVEDGVTLTY EALARRSYRM ARLFHARGLQ
RQDVVAFLVG NRVEAVVAII AAQLAGLKAV SLHPMASEED HAFVLADAGV KALVVDDARF
AARAQVLLAR VANVLMMPLD DGVLGAGLAS QAAAMDDAEL EPGDDAAEIS KISYTGGTTG
RSKGILHTHR TVVTMLQAML ATYEWPQQIR YLVTTPISHA SGSLILPTLL RGGTVYLCDK
FSPSDFVSRV AEQRINLTFL VPTQIYALLD HAGLAEADLS SLELVLYGAS PIAPSRLQEA
LNRIGPVFGQ VYGQAEAPMT ISYLSRRDHD LSRSHLLSSC GKVMVGNQVK LLDSARREVP
VGEVGELCVR GPLVMDGYLN RPEENEKVFA GDWLHTGDMA RRDAAGYLYI VDRAKDMIIT
GGFNVYPSEV EHCLAQHPAI AMSAVFGVPD EKWGESVTAI VVPKPGQTPD ANELIEFVKS
RKGVVNAPKT VIFAEQLPMT ALGKIDRKAI RGSYWNGKDR QVA
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