Gene Rmet_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3781 
Symbol 
ID4040616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp317354 
End bp318112 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID637979202 
ProductAsp/Glu racemase 
Protein accessionYP_585920 
Protein GI94312711 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3473] Maleate cis-trans isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGT ACCGAATCGG GCAAATCGTG CCCAGCTCCA ACATCACGAT GGAGCGCGAA 
GTCCCCGCCA TCTTCAATGC CCGCATGCAG GTGCTCCCCG AGCAATTCAG TTTCCACGCG
AGCCGCGTGC GCATGCATCG CGTGGTGGCC GAGGAACTGG AGAGGATGAA CCGGGACATG
GGCCGCTGCG CGCTGGAACT GGCCGACGCC CGTGTGGATG TCATGAGCAC GGCGTGCCTG
GTGGCCACCA TGTGCATGGG TAACGGTTAT CACCGTCAGG TCATCGAGGA GCTCGGTGCC
GCTATCGGGG ACGCGCCGTA TCGCCCGCAG ATCATGACAT CGGCCGGCGC GCTGGTGGAG
GAACTGAAGG ACTTCGGCGC CCGACGCATT TCATTGATGG CCCCGTACAG CGATGCCCTG
ACGAAAACCG TCGTCGAGTA CATCGAGCAC GAAGGCATCG AAGTGAAGGA TGTCATCAAC
TTCTCGATCC TCGACAACCT TGAGGTTGGA GAGCGGGACC CGCTGCGACT GCTCGAAGAC
GTGAAGCGGT TGGACACCAA GGGTGTGGAC ACCGTGGTCC TGTCCGCCTG CGTGCAGATG
CCGTCGTTGG CGGCGCTCGA GCCCGCCCAG CAAGCGCTTG GCATTCCGGT GACGTCGACG
GCGGCCTGCA CCGTGCGGCA GATGCTGCGC AGGCTCGGCC TGGAAGCCAA GGCGCCGGGC
GCAGGCGCTT ATCTGGGCAG CCAGACCGGA CTGCGCTGA
 
Protein sequence
MSTYRIGQIV PSSNITMERE VPAIFNARMQ VLPEQFSFHA SRVRMHRVVA EELERMNRDM 
GRCALELADA RVDVMSTACL VATMCMGNGY HRQVIEELGA AIGDAPYRPQ IMTSAGALVE
ELKDFGARRI SLMAPYSDAL TKTVVEYIEH EGIEVKDVIN FSILDNLEVG ERDPLRLLED
VKRLDTKGVD TVVLSACVQM PSLAALEPAQ QALGIPVTST AACTVRQMLR RLGLEAKAPG
AGAYLGSQTG LR