Gene Rmet_3780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_3780 
Symbol 
ID4040615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp316884 
End bp317333 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID637979201 
Productputative thioesterase 
Protein accessionYP_585919 
Protein GI94312710 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCG CCACGGAGTA CGTGCTGAGC GAAAGTCCGT TCGTGGTCAG GCGTACCGTG 
CGTTGGGGAG ATTGCGACCC GGCAGGCGTC GTCTACACAG GCCGGTTCAC CGACTATCTG
CTTGGAGCGG TCGGTCTCTA CACCGCGCAC ATGGCGGGCG GCGACGGCCG GCTGGGAGAG
GTCCACGGCG TCGGTACCCC ATGCAAGGCC ATGCGTTTCG AATTCATCGG CACGCTTTGG
CCGGATGACG TGATCGATAT CACGTGCGCG GTCGAAGCCA TTCGGACCAG ATCGTTCGAT
ATTCGCTGCG TGGCCCGCCG ACCTGACGGC GCCCCGGTCT TCGACGCCAT GTTCTCGCCG
ATCTGCGTGC GGCTGGACCG GCGCGAGGGG ACGCCAATTC CCGACTCGCT GCGCGCGGTG
CTGAACCGCT TCCTGTCGCC AGCGCTCTGA
 
Protein sequence
MMRATEYVLS ESPFVVRRTV RWGDCDPAGV VYTGRFTDYL LGAVGLYTAH MAGGDGRLGE 
VHGVGTPCKA MRFEFIGTLW PDDVIDITCA VEAIRTRSFD IRCVARRPDG APVFDAMFSP
ICVRLDRREG TPIPDSLRAV LNRFLSPAL