| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3745 |
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| Symbol | |
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| ID | 4040716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 288812 |
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| End bp | 289990 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637979168 |
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| Product | putative GGDEF/cyclase |
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| Protein accession | YP_585886 |
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| Protein GI | 94312677 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCAA CCCACAAGCC GATGCCAGAA CCTACCGAGG TCTTCACGCT GCCGCGCTGG
AAGATAACAA GATGGCTAAC GGACACAGAC AGAGACGTCC CTACTGACAT CAAGCGTGCG
CTTATCGGAA GCTTGTTCGG GACTTTATCC ATCTTCGTTG GCGGGGTCGT CAATACGCTG
TTAGTCGCTG CGTTAATAGC CTGGCATATC CAACGCCCGG CATTCTTTGC ATGGTTCGGA
TTGGAGTGCC TGATTTGCAT CGCTCGAATC AGCATCTTGG TTTCGGCGCG GCGACGAGCA
CGTGCTGCAC GGTCGACCCA TACCGACTTG CACCTGGCGC TTAGTCTGGC TTGGGCCTTT
AGCGTAGGAT TGGGAACCTA CTTGAGCATT ACAAGCGGAA ACTGGCTTGC TGCCGCCCTA
GCATGCCTTT CGTCCGCTGC AATGATTGGT GGCATTTGCT TTCGGAACTT CGGGGCACCC
AGGATGAGCG GGCTAATGAT TCTGCTGGCC CTGGGTCCAT GCTGCCTTGG TGCAATCGTC
GCACGTGAGC CGCTGTTCCT TCTGACACTG ATTCAGTTGC CCGTCTACGT GGCCAGCATG
ACGAGTGCAT CCTTTCGCAT GCATGCGATG CTGGTTGCGA CAATGCAGTC GGAGCGCGAG
AACGCACACC GCGCTCGCCA CGATTCAATG ACTGGACTTC TGAATCGAGG CAGTTTGCTG
GCTGAAATCA GGGCGACAAT GGAGTGCAAT GCCATTTCCC CACTGCGCTC TGCGCTCCTC
TATCTGGACC TGGACGGCTT CAAACGCATC AATGACGTAC ATGGTCACGG CTGCGGAGAC
GAACTGCTCC AGCAAGTGGC GGACCGAATG CGAGCGACGG TGCCCGAAGG CACTCACGTC
TCTCGCATTG GAGGAGATGA GTTTGTCATC CTGCTGAACC TCCATGAGAG TGATGACGTG
CAAGTGCTCG CGCAACGGCT GCTACGAGAC ATAGCTGTAC CGTATCTGCT GGCCAATGGA
GAGACGGTGG CGATTGGCGT AAGCATCGGC ATTACCCATA TCTCTCCCAA CGGACAAAGC
GCCGATGCAG TCCTTAATGT CGCCGACCGC GCACTATATG TCGCAAAGGC GCGCGGCAAG
GGATGCTTCC ATTTTTCGGA GGCGGTCCAG GCGCTCTAG
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| Protein sequence | MSPTHKPMPE PTEVFTLPRW KITRWLTDTD RDVPTDIKRA LIGSLFGTLS IFVGGVVNTL
LVAALIAWHI QRPAFFAWFG LECLICIARI SILVSARRRA RAARSTHTDL HLALSLAWAF
SVGLGTYLSI TSGNWLAAAL ACLSSAAMIG GICFRNFGAP RMSGLMILLA LGPCCLGAIV
AREPLFLLTL IQLPVYVASM TSASFRMHAM LVATMQSERE NAHRARHDSM TGLLNRGSLL
AEIRATMECN AISPLRSALL YLDLDGFKRI NDVHGHGCGD ELLQQVADRM RATVPEGTHV
SRIGGDEFVI LLNLHESDDV QVLAQRLLRD IAVPYLLANG ETVAIGVSIG ITHISPNGQS
ADAVLNVADR ALYVAKARGK GCFHFSEAVQ AL
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