| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3721 |
|---|
| Symbol | |
|---|
| ID | 4040692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cupriavidus metallidurans CH34 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007974 |
|---|
| Strand | - |
|---|
| Start bp | 261660 |
|---|
| End bp | 262697 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637979144 |
|---|
| Product | extra-cytoplasmic solute receptor |
|---|
| Protein accession | YP_585862 |
|---|
| Protein GI | 94312653 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.31096 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCC ATGCGGACGC AATAAAGAGA ATCAAAGTAG GAGATGACGT CTTGCGTATC
AAGCATCAAG CCTCGCGCAT TGCGCGCGTT GTAGCCATTG CCGTTGCCGG CCTTTCCATC
CACCACGGCG CCATCGCCGC CGACGCATGG CCGGCCAAGC CGATCAAGGT GATCGTGCCC
TATACCCCGG GTGGCTCCAC CGATACCGTT GCGCGCGTGG TGTTCGAGAA GGTTTCACAA
AGCCTTGGCC AGCCGATCGT GATCGAGAAC AAGCCGGGCG CCAACAGCAC GCTGGGCGTC
GGCGTGGTGG CCCGTTCGGC GCCCGATGGC TACACCTTCG TGTCCGTGCT GGCCGCGTAC
AGCGCGAACA TGTCGCTGTA TTCGAAGCTG AGCTACAAGC CCACCGACCT GGCGCCGGTC
GCCGAGATGG CTGAACTGCC GCTGTTCCTG TTCTCCAGCA AGAAGCTGCC GGTCAAGACC
GTGGCCGAAC TGGTCGACTA CGGCAAGAAG CATCCGGATA CGCTGACGTT CGGCTCCAGC
GGCATCGGCA GTTCGGCGCA CCTGACGGGC GAGCGGCTGG CGATGGAATC GAAGGTCAAG
ATGACCCACA TTCCGTACAA CGGCAGCGCC CCGATCCTGC CCGCGCTGGT CTCGGGCGAG
ATCTCGATGG CGTTCGATCC GCTGCTGGTG CCGATGCCCC ACGTGAAGTC GGGCAAGATC
AACGTGCTGG CCGTGGCATC GGCCAAGCGC TGGCCGAGCG AGCCGAACAT CCCGACGATG
GAAGAGTCCG GTTTCCCGGG CTTTGTGATG AGCTCCTGGA CGGGCCTGCT GGCACCGGCA
GGCACGCCGC AGCCCATCAT CGACCGGATG GCGAAAGAGA TCGCCGCCGC CACGCGTAAC
CCCGACGTGA CGAAGAAGCT GACGGAGCTG GGCTTTATTC CAGTCGGCGG CACGCCCGAG
GAGTTCCGCA AGCTGATCGA ACGCGATACG TCGCGCTACG GGCAAATCGT GAAGGCTGGC
AAGATCACGC TGGACTGA
|
|---|
| Protein sequence | MFRHADAIKR IKVGDDVLRI KHQASRIARV VAIAVAGLSI HHGAIAADAW PAKPIKVIVP
YTPGGSTDTV ARVVFEKVSQ SLGQPIVIEN KPGANSTLGV GVVARSAPDG YTFVSVLAAY
SANMSLYSKL SYKPTDLAPV AEMAELPLFL FSSKKLPVKT VAELVDYGKK HPDTLTFGSS
GIGSSAHLTG ERLAMESKVK MTHIPYNGSA PILPALVSGE ISMAFDPLLV PMPHVKSGKI
NVLAVASAKR WPSEPNIPTM EESGFPGFVM SSWTGLLAPA GTPQPIIDRM AKEIAAATRN
PDVTKKLTEL GFIPVGGTPE EFRKLIERDT SRYGQIVKAG KITLD
|
|---|
| |