| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3708 |
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| Symbol | pcaK2 |
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| ID | 4040679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | + |
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| Start bp | 250312 |
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| End bp | 251637 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637979131 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_585849 |
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| Protein GI | 94312640 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0245193 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGC AACGGCTCGA CATTCGGGCC CATATCAACG AACGCAAGAT GTCCGGCTAC
CAGTGGCTGC TGCTGGTGCT GTGTTTCCTG ATCGTCGCCA CGGACGGGAT GGATGTGGCC
ATCATGGGCT TCCTCGCGCC GGACATCACA CGCGAATGGG GCATCTCGAA GGCCGCCTTT
GGCGTGGTGA TGAGCGCCGC GCCGATCGGC CTGGCTATCG GCGCGCTGGT GGTCGGACCG
CTGTCCGACC GCTTCGGCCG CAAGAAGCTG CTGGTCGGTT CCATCGCGCT GTTCGGCGTA
TTCAATCTGC TGAGCGCATT CGCCGATGGC ACGGCAACCT TGTCGCTGCT GCGCTTCCTG
ACCGGCCTTG GTCTGGGCGC GGCCATGCCG AGCACGACCA CACTGCTCTC CGAGTATGTG
CCGGAACGTT CGCGCAGCAT GTTGCTGGCG ACGATGTTCA CGGGCTTCAA CCTCGGCTCC
GCGCTGGTGG GCTTCGGTGC CGCCGCGCTT CTGCCGCATC ATGGCTGGCG CGCGGTGCTG
GTCGCCGGTG GCGCGATTCC GCTGATCTGC CTGCCGTTCT ACATCATGCT GATTCCGGAA
TCGGCGCGCT TCATGGTGGT CCGCAATGTC GCGCCGGCGC GAATCGCCCG CACGCTGCGC
CGCGTGATCG GCAGCGTGGT GGCCGATGAC ACCGTGTTCA CGATCAGCGA GCCGCCGGTT
TCCGGCAAGC AGCCCGTCCG CACGCTGTTG TCGTCGGGCT ATCGCAGCAT GACGCTGGCG
CTGTGGGTCA CGTACTTCAT GGGGCTGCTC GTGATCTACC TGCTGAGCGG CTGGCTGCCC
ACGCTGATCA AGGACGCCGG CCTGCCGATC GATCGCGCCG CCAACCTGAC GGCACTGTTC
CAGCTCGGCG GTACCGTCGG CGCGCTGGTG GTGGGCTACT GCATGGACCG CTTCGCGCCC
CATCGCGTGA TCGGCGTGTC ATATGTGCTG GGCGCGATGT TCATCCTGAT GCTGGCTTCG
GGCAGCGTCA CGTCGTCGAT GTTCGCACTC TACGTGCTGC TGGCCGGCTT CTGCATGAGC
GGCGCGCAGA CCGGGCTCAA CGCTTTCGCG CCGCAGTGCT ATCCCACGCC GGTGCGTGCC
ACTGGCGTAA GCTGGATGCT CGGCATCGGC CGCTTCGGCA GCATCACCGG CTCCATGGCG
GGCGGTGTGC TGCTGTCGAT GGGCTGGAGT TTCAGCGCGG TGATTGCCAT CCTGGCCGTT
CCGGCGACCA TGGCGGCAAT CTCCATTGTT TCCACGAAGG CGCAGCCTCG CGCCGTAACC
GCTTGA
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| Protein sequence | MTTQRLDIRA HINERKMSGY QWLLLVLCFL IVATDGMDVA IMGFLAPDIT REWGISKAAF
GVVMSAAPIG LAIGALVVGP LSDRFGRKKL LVGSIALFGV FNLLSAFADG TATLSLLRFL
TGLGLGAAMP STTTLLSEYV PERSRSMLLA TMFTGFNLGS ALVGFGAAAL LPHHGWRAVL
VAGGAIPLIC LPFYIMLIPE SARFMVVRNV APARIARTLR RVIGSVVADD TVFTISEPPV
SGKQPVRTLL SSGYRSMTLA LWVTYFMGLL VIYLLSGWLP TLIKDAGLPI DRAANLTALF
QLGGTVGALV VGYCMDRFAP HRVIGVSYVL GAMFILMLAS GSVTSSMFAL YVLLAGFCMS
GAQTGLNAFA PQCYPTPVRA TGVSWMLGIG RFGSITGSMA GGVLLSMGWS FSAVIAILAV
PATMAAISIV STKAQPRAVT A
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