| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmet_3705 |
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| Symbol | ligJ |
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| ID | 4040676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cupriavidus metallidurans CH34 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007974 |
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| Strand | - |
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| Start bp | 246580 |
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| End bp | 247605 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637979128 |
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| Product | 4-oxalomesaconate hydratase |
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| Protein accession | YP_585846 |
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| Protein GI | 94312637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0366284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCG ATTGCCACGG GCACTTCACC ACCGCCCCCA AGGCCCTGGA AGACTGGCGC
CAACGCCAGA TCGCCAGCCT GAACATCCCT GCGCTCGCGC CTTCCGTCAG TGAACTGCGC
ATCAGTGATG ACGAACTACG TGACGCCATC GCCAGCAATC AGCTTCGCCT GATGCGCGAG
CGTGGGATGG ACCTGACGAT CTTCTCGCCG CGCGCGTCGT TCATGGCGCA CCACATCGGC
AGCTTCGAAA CCAGCGCCAC GTGGGCCGCC ATCTGCAACA CGCTCTGCCA CCGTGTCAGC
GAGCTGTTCC CCGACCAGTT CGTCGGCGCC GCCATGCTGC CGCAATCGCC GGGAATCGAT
ACCAAGAGCT GCGTCAAGGA ACTCGAACGT TGCGTGCTCG AGTACGGCTT TGTTGGCGTG
AACCTGAATC CAGATCCGTC TGGCGGACAC TGGACATCGC CACCGCTATC CGATCCGTAC
TGGTATCCGA TCTACGAGAA GCTCGTCGAA CTCGACGTGC CGGCCATGAT TCACGTCAGC
ACGAGCTGCA ACGCGTGCTT CCACACCACT GGCGCGCACT ACCTGAACGC CGACACCACC
GCATTCATGC AGGTGCTGAC CAGCGACCTG TTTCGGCGCT TTCCGACGCT GAAGTTCGTG
ATTCCGCACG GTGGCGGCGC GGTGCCCTAC CACTGGGGCC GGTTCCGTGG GTTGGCGCAG
GAGATGAAGC TGCCGCCGCT TGGCGAACAC CTGCTCAATA ACGTCTTCTT CGATACATGC
GTCTATCACC AGCCTGGCAT CGACCTGCTG ACGCGCGTGA TACCGGTCAA GAACGTGCTG
TTCGCCTCGG AGATGATCGG CGCGGTACGT GGCATCGACC CCGAGACCGG CCACTACTAC
GACGATACGC GGCGCTACAT CGATCAGGCC GCGCTCTCTG ACGAGGAACG TCACCAGATT
TACGAAGGCA ACGCGCGGCG CGTTTACAGC CGACTTGACG CGCGACTCAA GGCACGTGGC
CACTAG
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| Protein sequence | MIIDCHGHFT TAPKALEDWR QRQIASLNIP ALAPSVSELR ISDDELRDAI ASNQLRLMRE
RGMDLTIFSP RASFMAHHIG SFETSATWAA ICNTLCHRVS ELFPDQFVGA AMLPQSPGID
TKSCVKELER CVLEYGFVGV NLNPDPSGGH WTSPPLSDPY WYPIYEKLVE LDVPAMIHVS
TSCNACFHTT GAHYLNADTT AFMQVLTSDL FRRFPTLKFV IPHGGGAVPY HWGRFRGLAQ
EMKLPPLGEH LLNNVFFDTC VYHQPGIDLL TRVIPVKNVL FASEMIGAVR GIDPETGHYY
DDTRRYIDQA ALSDEERHQI YEGNARRVYS RLDARLKARG H
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